| Motif id | From | To | Definition | E value | Score |
| pf:MATH_2 | 56 | 179 | | 3.9e-38 | - |
| pf:MATH | 61 | 181 | MATH domain
| 2.9e-17 | - |
| pf:UCH | 199 | 521 | Ubiquitin carboxyl-terminal hydrolase
| 5.9e-59 | - |
| pf:UCH_1 | 199 | 474 | Ubiquitin carboxyl-terminal hydrolase
| 6e-15 | - |
| pf:Malt_amylase_C | 508 | 536 | Maltogenic Amylase, C-terminal domain
| 0.52 | - |
| pf:ubiquitin | 595 | 627 | Ubiquitin family
| 0.17 | - |
| pf:CDI_Immunity_Comp | 597 | 638 | | 0.39 | - |
| pf:SASP | 606 | 622 | Small, acid-soluble spore proteins, alpha/beta type
| 0.24 | - |
| pf:USP7_ICP0_bdg | 625 | 875 | ICP0-binding domain of Ubiquitin-specific protease 7
| 7.5e-77 | - |
| pf:USP7_C2 | 799 | 851 | Ubiquitin-specific protease C-terminal
| 0.25 | - |
| pf:RA | 818 | 858 | Ras association (RalGDS/AF-6) domain
| 0.033 | - |
| pf:USP7_C2 | 885 | 1095 | Ubiquitin-specific protease C-terminal
| 2.9e-57 | - |