| Motif id | From | To | Definition | E value | Score |
| pf:HTH_11 | 4 | 27 | HTH domain
| 0.17 | - |
| pf:Fe_dep_repress | 4 | 29 | Iron dependent repressor, N-terminal DNA binding domain
| 0.78 | - |
| pf:Sigma54_DBD | 6 | 30 | Sigma-54, DNA binding domain
| 0.0014 | - |
| pf:HTH_31 | 8 | 33 | Helix-turn-helix domain
| 0.16 | - |
| pf:HTH_Tnp_4 | 8 | 28 | Helix-turn-helix of DDE superfamily endonuclease
| 0.58 | - |
| pf:LacI | 9 | 59 | Bacterial regulatory proteins, lacI family
| 1.2e-07 | - |
| pf:HTH_38 | 9 | 28 | Helix-turn-helix domain
| 0.097 | - |
| pf:HTH_3 | 9 | 31 | Helix-turn-helix
| 0.58 | - |
| pf:Peripla_BP_1 | 71 | 326 | Periplasmic binding proteins and sugar binding domain of LacI family
| 1.5e-22 | - |
| pf:Peripla_BP_4 | 75 | 319 | Periplasmic binding protein domain
| 3.7e-14 | - |
| pf:Peripla_BP_3 | 178 | 337 | Periplasmic binding protein-like domain
| 5.5e-32 | - |