SSDB Motif Search Result


Organism : Carnobacterium maltaromaticum
Gene : BN424_2026
Definition : no KO assigned | (GenBank) marR; marR family protein
Motif idFromToDefinitionE valueScore
pf:DUF84623184 0.034-
pf:MarR_23692MarR family 6.3e-10-
pf:MarR3894MarR family 1.9e-09-
pf:Staph_reg_Sar_Rot38104 1.8e-07-
pf:Penicillinase_R4093Penicillinase repressor 0.73-
pf:HTH_2741102Winged helix DNA-binding domain 1.5e-06-
pf:FilR1_N4987 0.21-
pf:TrmB5088Sugar-specific transcriptional regulator TrmB 0.0016-
pf:DUF734251127 0.061-
pf:HTH_245283Winged helix-turn-helix DNA-binding 0.00064-
pf:HTH_415382Helix-turn-helix domain 0.047-
pf:HxlR53113HxlR-like helix-turn-helix 0.11-
pf:HTH_3454111Winged helix DNA-binding domain 0.00011-
pf:WHD_ArnR154108 0.00055-
pf:DnaD_N5494 0.42-
pf:Fe_dep_repress5483Iron dependent repressor, N-terminal DNA binding domain 0.48-
pf:GntR5686Bacterial regulatory proteins, gntR family 0.18-
pf:HTH_365682Helix-turn-helix domain 0.53-

cml:BN424_2026 pf:DUF8462 pf:MarR_2 pf:MarR pf:Staph_reg_Sar_Rot pf:Penicillinase_R pf:HTH_27 pf:FilR1_N pf:TrmB pf:DUF7342 pf:HTH_24 pf:HTH_41 pf:HxlR pf:HTH_34 pf:WHD_ArnR1 pf:DnaD_N pf:Fe_dep_repress pf:GntR pf:HTH_36

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