SSDB Motif Search Result


Organism : Caldicellulosiruptor saccharolyticus
Gene : Csac_1228
Definition : alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Motif idFromToDefinitionE valueScore
pf:HTH_26129 0.2-
pf:MarR_2222MarR family 0.0058-
pf:HTH_Tnp_ISL3222 0.0055-
pf:HTH_Crp_2223 0.033-
pf:TetR_N220Bacterial regulatory proteins, tetR family 0.014-
pf:HTH_10223HTH DNA binding domain 0.084-
pf:LacI348Bacterial regulatory proteins, lacI family 2.1e-21-
pf:HTH_3339Helix-turn-helix 2.7e-06-
pf:HTH_19339Helix-turn-helix domain 0.00021-
pf:HTH_38322 0.00074-
pf:HTH_31339 0.0011-
pf:HTH_23323 0.0031-
pf:HTH_7323Helix-turn-helix domain of resolvase 0.0059-
pf:HTH_24321 0.047-
pf:HTH_AraC322Bacterial regulatory helix-turn-helix proteins, AraC family 0.021-
pf:HTH_IclR323IclR helix-turn-helix domain 0.014-
pf:HTH_28322 0.095-
pf:HTH_5320Bacterial regulatory protein, arsR family 0.098-
pf:Sigma54_DBD329Sigma-54, DNA binding domain 0.12-
pf:MarR322MarR family 0.24-
pf:MerR318MerR family regulatory protein 0.24-
pf:HTH_29322 0.26-
pf:HTH_AsnC-type320 0.28-
pf:CENP-B_N528CENP-B N-terminal DNA-binding domain 0.045-
pf:Peripla_BP_174312Periplasmic binding proteins and sugar binding domain of LacI family 5.9e-23-
pf:Peripla_BP_476312 1.1e-09-
pf:Peripla_BP_3173334 1.3e-31-

csc:Csac_1228 pf:HTH_26 pf:MarR_2 pf:HTH_Tnp_ISL3 pf:HTH_Crp_2 pf:TetR_N pf:HTH_10 pf:LacI pf:HTH_3 pf:HTH_19 pf:HTH_38 pf:HTH_31 pf:HTH_23 pf:HTH_7 pf:HTH_24 pf:HTH_AraC pf:HTH_IclR pf:HTH_28 pf:HTH_5 pf:Sigma54_DBD pf:MarR pf:MerR pf:HTH_29 pf:HTH_AsnC-type pf:CENP-B_N pf:Peripla_BP_1 pf:Peripla_BP_4 pf:Peripla_BP_3


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