SSDB Motif Search Result
Organism :
Escherichia coli K-12 DH10B
Gene :
ECDH10B_3852
Definition :
K07686 two-component system, NarL family, uhpT operon response regulator UhpA | (GenBank) uhpA; DNA-binding response regulator in two-component regulatory system wtih UhpB
Motif id
From
To
Definition
E value
Score
pf:Response_reg
4
112
Response regulator receiver domain
1.4e-24
-
pf:Transpeptidase
87
151
Penicillin binding protein transpeptidase domain
0.31
-
pf:HTH_36
118
178
Helix-turn-helix domain
0.61
-
pf:DUF8462
134
179
0.012
-
pf:GerE
136
191
Bacterial regulatory proteins, luxR family
2e-22
-
pf:DUF742
136
179
Protein of unknown function (DUF742)
0.53
-
pf:HTH_Tnp_ISL3
139
170
Helix-turn-helix domain of transposase family ISL3
0.00038
-
pf:HTH_38
139
169
Helix-turn-helix domain
0.0046
-
pf:HTH_23
140
173
Homeodomain-like domain
5.3e-05
-
pf:HTH_Tnp_1
141
185
Transposase
0.0047
-
pf:Sigma70_ECF
141
170
ECF sigma factor
0.044
-
pf:DUF7342
141
180
0.26
-
pf:TnsD
143
173
Tn7-like transposition protein D
0.43
-
pf:HTH_28
144
169
Helix-turn-helix domain
0.0064
-
pf:HTH_7
144
169
Helix-turn-helix domain of resolvase
0.034
-
pf:Cadherin_2
144
177
Cadherin-like
0.34
-
pf:Terminase_5
145
170
Putative ATPase subunit of terminase (gpP-like)
0.012
-
pf:HTH_AraC
146
168
Bacterial regulatory helix-turn-helix proteins, AraC family
0.25
-
pf:HTH_40
147
179
Helix-turn-helix domain
0.009
-
pf:HTH_29
148
169
Winged helix-turn helix
0.072
-
pf:Sigma70_r4_2
150
179
Sigma-70, region 4
0.00039
-
pf:DUF7646
150
191
0.019
-
pf:HTH_IclR
150
173
IclR helix-turn-helix domain
0.21
-
pf:HTH_20
150
172
Helix-turn-helix domain
0.32
-
pf:Sigma70_r4
150
176
Sigma-70, region 4
0.75
-
pf:PF0610-like_N
152
172
0.22
-
pf:HTH_24
153
179
Winged helix-turn-helix DNA-binding
0.0036
-
pf:HTH_5
153
176
Bacterial regulatory protein, arsR family
0.033
-
pf:HTH_AsnC-type
154
170
AsnC-type helix-turn-helix domain
0.13
-
pf:HTH_10
154
175
HTH DNA binding domain
0.46
-
pf:DUF7123
155
179
0.45
-
[
GENES
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KEGG2
|
KEGG
|
GenomeNet
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