| Motif id | From | To | Definition | E value | Score |
| pf:IGPS | 27 | 254 | Indole-3-glycerol phosphate synthase
| 2.5e-70 | - |
| pf:TPR_COPA_B | 111 | 198 | | 0.31 | - |
| pf:NanE | 144 | 241 | Putative N-acetylmannosamine-6-phosphate epimerase
| 0.009 | - |
| pf:NMO | 148 | 268 | Nitronate monooxygenase
| 0.0029 | - |
| pf:QRPTase_C | 153 | 241 | Quinolinate phosphoribosyl transferase, C-terminal domain
| 2.9e-05 | - |
| pf:ThiG | 155 | 244 | Thiazole biosynthesis protein ThiG
| 0.34 | - |
| pf:PDZ | 163 | 193 | PDZ domain (Also known as DHR or GLGF)
| 0.53 | - |
| pf:FMN_dh | 166 | 246 | FMN-dependent dehydrogenase
| 3.4e-05 | - |
| pf:DHO_dh | 200 | 244 | Dihydroorotate dehydrogenase
| 0.0043 | - |
| pf:IMPDH | 200 | 238 | IMP dehydrogenase / GMP reductase domain
| 0.35 | - |
| pf:IMPDH | 206 | 243 | IMP dehydrogenase / GMP reductase domain
| 0.092 | - |
| pf:His_biosynth | 208 | 242 | Histidine biosynthesis protein
| 0.078 | - |
| pf:Trp_syntA | 216 | 255 | Tryptophan synthase alpha chain
| 0.12 | - |