SSDB Motif Search Result


Organism : Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Gene : KPN_03228
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; DNA helicase, ATP-dependent dsDNA/ssDNA exonuclease V subunit, ssDNA endonuclease
Motif idFromToDefinitionE valueScore
pf:RecD_N12112 1.3e-29-
pf:T2SSE152192Type II/IV secretion system protein 0.067-
pf:PhoH155305PhoH-like protein 0.035-
pf:DEAD156277DEAD/DEAH box helicase 0.45-
pf:AAA_19158308AAA domain 3.1e-34-
pf:AAA_11158220AAA domain 1e-05-
pf:nSTAND3159195 0.0042-
pf:AAA_30160319AAA domain 4.7e-27-
pf:UvrD-helicase161246UvrD/REP helicase N-terminal domain 6e-07-
pf:MukB163213MukB N-terminal 0.059-
pf:AAA_22167290AAA domain 3.7e-06-
pf:TrwB_AAD_bind168192Type IV secretion-system coupling protein DNA-binding domain 0.44-
pf:ATPase168193KaiC 0.52-
pf:SLFN-g3_helicase169276 0.00087-
pf:AAA_16169258AAA ATPase domain 0.035-
pf:CbiA170193CobQ/CobB/MinD/ParA nucleotide binding domain 0.22-
pf:SRP54171193SRP54-type protein, GTPase domain 0.33-
pf:NAT10_TcmA_helicase172289 1.1e-13-
pf:Viral_helicase1172207Viral (Superfamily 1) RNA helicase 0.32-
pf:AAA_28172190AAA domain 0.042-
pf:NTPase_1172192NTPase 0.95-
pf:AAA173192ATPase family associated with various cellular activities (AAA) 0.56-
pf:SH3_13459508 1.4e-08-
pf:Viral_helicase1534584Viral (Superfamily 1) RNA helicase 3.4e-05-
pf:UvrD_C_2537584UvrD-like helicase C-terminal domain 3.7e-12-
pf:UvrD_C539583UvrD-like helicase C-terminal domain 0.23-

kpn:KPN_03228 pf:RecD_N pf:T2SSE pf:PhoH pf:DEAD pf:AAA_19 pf:AAA_11 pf:nSTAND3 pf:AAA_30 pf:UvrD-helicase pf:MukB pf:AAA_22 pf:TrwB_AAD_bind pf:ATPase pf:SLFN-g3_helicase pf:AAA_16 pf:CbiA pf:SRP54 pf:NAT10_TcmA_helicase pf:Viral_helicase1 pf:AAA_28 pf:NTPase_1 pf:AAA pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C

[ GENES | KEGG2 | KEGG | GenomeNet ]