| Motif id | From | To | Definition | E value | Score |
| pf:UCH_N | 1 | 105 | N-terminal of ubiquitin carboxyl-terminal hydrolase 37
| 2.9e-44 | - |
| pf:UCH | 344 | 950 | Ubiquitin carboxyl-terminal hydrolase
| 2.1e-56 | - |
| pf:UCH_1 | 349 | 569 | Ubiquitin carboxyl-terminal hydrolase
| 0.039 | - |
| pf:TP0900_4th | 354 | 451 | | 0.063 | - |
| pf:SprA-related | 708 | 840 | SprA-related family
| 0.4 | - |
| pf:UIM | 809 | 824 | Ubiquitin interaction motif
| 0.084 | - |
| pf:UIM | 831 | 846 | Ubiquitin interaction motif
| 0.00031 | - |
| pf:UCH_1 | 863 | 929 | Ubiquitin carboxyl-terminal hydrolase
| 0.014 | - |