SSDB Motif Search Result


Organism : Mycobacterium sp. KMS
Gene : Mkms_4068
Definition : K03088 RNA polymerase sigma-70 factor, ECF subfamily | (GenBank) RNA polymerase, sigma 29 subunit, SigE
Motif idFromToDefinitionE valueScore
pf:Sigma70_r296162Sigma-70 region 2 1.3e-22-
pf:Sigma70_ECF157249ECF sigma factor 0.001-
pf:TnsD190239Tn7-like transposition protein D 0.59-
pf:Sigma70_r4_2195245Sigma-70, region 4 4.1e-17-
pf:Sigma70_r4198246Sigma-70, region 4 5.7e-14-
pf:PhyR_sigma-like199235 0.11-
pf:HTH_SB203239 0.14-
pf:HTH_28206247Helix-turn-helix domain 0.11-
pf:HTH_23209240Homeodomain-like domain 0.0086-
pf:HTH_AsnC-type218240AsnC-type helix-turn-helix domain 0.26-

mkm:Mkms_4068 pf:Sigma70_r2 pf:Sigma70_ECF pf:TnsD pf:Sigma70_r4_2 pf:Sigma70_r4 pf:PhyR_sigma-like pf:HTH_SB pf:HTH_28 pf:HTH_23 pf:HTH_AsnC-type

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