| Motif id | From | To | Definition | E value | Score |
| pf:Acyl-CoA_dh_N | 3 | 117 | Acyl-CoA dehydrogenase, N-terminal domain
| 3.8e-16 | - |
| pf:Acyl-CoA_dh_M | 125 | 218 | Acyl-CoA dehydrogenase, middle domain
| 1.8e-23 | - |
| pf:Acyl-CoA_dh_1 | 231 | 377 | Acyl-CoA dehydrogenase, C-terminal domain
| 1.7e-29 | - |