| Motif id | From | To | Definition | E value | Score |
| pf:CS | 70 | 128 | CS domain
| 0.7 | - |
| pf:CS | 346 | 432 | CS domain
| 0.25 | - |
| pf:USP19_linker | 433 | 556 | Linker region of USP19 deubiquitinase
| 1e-45 | - |
| pf:UCH | 558 | 1290 | Ubiquitin carboxyl-terminal hydrolase
| 1.7e-72 | - |
| pf:UCH_1 | 559 | 750 | Ubiquitin carboxyl-terminal hydrolase
| 0.028 | - |
| pf:USP7_C2 | 741 | 831 | Ubiquitin-specific protease C-terminal
| 0.002 | - |
| pf:zf-MYND | 852 | 894 | MYND finger
| 2e-08 | - |
| pf:MYND_ZMYND11_ZMYD8 | 872 | 894 | | 0.0058 | - |
| pf:UCH_1 | 1131 | 1272 | Ubiquitin carboxyl-terminal hydrolase
| 5.5e-07 | - |