SSDB Motif Search Result


Organism : Afipia carboxidovorans OM4
Gene : OCA4_c11710
Definition : K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) putative ATP-dependent DNA ligase
Motif idFromToDefinitionE valueScore
pf:LigD_N38142DNA polymerase Ligase (LigD) 2.3e-43-
pf:DNA_ligase_A_M265437ATP dependent DNA ligase domain 4e-26-
pf:RNA_ligase271436RNA ligase 0.00034-
pf:RHH_11323369 0.25-
pf:DNA_ligase_A_C453547ATP dependent DNA ligase C terminal region 1e-24-
pf:LigD_Prim-Pol617867 5.9e-86-
pf:DNA_primase_S718840DNA primase small subunit 0.19-

oco:OCA4_c11710 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:RHH_11 pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

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