SSDB Motif Search Result
Organism :
Oceanobacillus iheyensis
Gene :
OB2012
Definition :
K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) conjugation transfer protein
Motif id
From
To
Definition
E value
Score
pf:OB_YrrC
16
92
1.5e-20
-
pf:DUF3912
19
53
Protein of unknown function (DUF3912)
0.57
-
pf:HHH_5
109
157
Helix-hairpin-helix domain
0.037
-
pf:HHH_RecD2
157
247
1.1e-28
-
pf:DUF5700
158
201
0.31
-
pf:DUF815
324
379
Protein of unknown function (DUF815)
0.21
-
pf:AAA_30
339
536
AAA domain
5.3e-45
-
pf:RsgA_GTPase
340
381
0.12
-
pf:AAA_11
341
381
AAA domain
0.00085
-
pf:UvrD-helicase
341
412
UvrD/REP helicase N-terminal domain
0.021
-
pf:AAA_19
343
487
AAA domain
1.7e-46
-
pf:NPHP3_N
344
376
0.3
-
pf:nSTAND3
345
380
0.013
-
pf:AAA_29
345
373
P-loop containing region of AAA domain
0.81
-
pf:TsaE
351
379
Threonylcarbamoyl adenosine biosynthesis protein TsaE
0.05
-
pf:Zeta_toxin
351
392
Zeta toxin
0.03
-
pf:AAA_16
352
379
AAA ATPase domain
0.12
-
pf:AAA_7
352
378
P-loop containing dynein motor region D3
0.38
-
pf:AAA_14
353
397
AAA domain
0.32
-
pf:AAA_22
353
477
AAA domain
0.016
-
pf:Rad17
353
391
Rad17 cell cycle checkpoint protein
0.57
-
pf:ABC_tran
353
392
ABC transporter
0.65
-
pf:TrwB_AAD_bind
353
377
Type IV secretion-system coupling protein DNA-binding domain
0.26
-
pf:NB-ARC
353
381
NB-ARC domain
0.9
-
pf:SLFN-g3_helicase
354
451
0.26
-
pf:NACHT
355
401
NACHT domain
0.61
-
pf:AAA_28
356
373
AAA domain
0.1
-
pf:AAA
356
377
ATPase family associated with various cellular activities (AAA)
0.041
-
pf:AAA_5
356
380
AAA domain (dynein-related subfamily)
0.84
-
pf:Viral_helicase1
357
509
Viral (Superfamily 1) RNA helicase
0.00063
-
pf:SH3_13
587
657
1.3e-20
-
pf:DUF8139
612
666
0.22
-
pf:DUF4926
616
644
Domain of unknown function (DUF4926)
0.019
-
pf:AAA_12
650
724
AAA domain
0.16
-
pf:Viral_helicase1
672
722
Viral (Superfamily 1) RNA helicase
0.00094
-
pf:UvrD_C_2
674
721
UvrD-like helicase C-terminal domain
4.5e-16
-
[
GENES
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KEGG2
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KEGG
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GenomeNet
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