SSDB Motif Search Result


Organism : Oceanobacillus iheyensis
Gene : OB2012
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) conjugation transfer protein
Motif idFromToDefinitionE valueScore
pf:DUF39121953Protein of unknown function (DUF3912) 0.39-
pf:HHH_5109157Helix-hairpin-helix domain 0.026-
pf:HHH_4157247Helix-hairpin-helix containing domain 3.8e-28-
pf:DUF5700164201 0.37-
pf:DUF815331379Protein of unknown function (DUF815) 0.21-
pf:AAA_30339535AAA domain 2.2e-45-
pf:RsgA_GTPase340382 0.099-
pf:AAA_11341381AAA domain 0.00058-
pf:UvrD-helicase341412UvrD/REP helicase N-terminal domain 0.014-
pf:AAA_19343487AAA domain 2.4e-47-
pf:DEAD343414DEAD/DEAH box helicase 0.66-
pf:AAA_29344372P-loop containing region of AAA domain 0.44-
pf:nSTAND3345380 0.0092-
pf:T2SSE345376Type II/IV secretion system protein 0.13-
pf:Zeta_toxin351392Zeta toxin 0.0055-
pf:TsaE351379Threonylcarbamoyl adenosine biosynthesis protein TsaE 0.049-
pf:AAA_7352378P-loop containing dynein motor region D3 0.27-
pf:AAA_14353397AAA domain 0.3-
pf:AAA_22353477AAA domain 0.011-
pf:Rad17353391Rad17 cell cycle checkpoint protein 0.39-
pf:TrwB_AAD_bind353377Type IV secretion-system coupling protein DNA-binding domain 0.18-
pf:AAA_16354378AAA ATPase domain 0.13-
pf:SLFN-g3_helicase354384 0.64-
pf:NACHT355401NACHT domain 0.41-
pf:AAA356377ATPase family associated with various cellular activities (AAA) 0.029-
pf:AAA_5356380AAA domain (dynein-related subfamily) 0.58-
pf:Viral_helicase1357509Viral (Superfamily 1) RNA helicase 0.00044-
pf:AAA_18357394AAA domain 0.2-
pf:AAA_28357373AAA domain 0.096-
pf:UvrD_C585721UvrD-like helicase C-terminal domain 0.43-
pf:SH3_13587657 2.6e-20-
pf:DUF4926616645Domain of unknown function (DUF4926) 0.013-
pf:AAA_12638724AAA domain 0.092-
pf:Viral_helicase1672722Viral (Superfamily 1) RNA helicase 0.00065-
pf:UvrD_C_2674722UvrD-like helicase C-terminal domain 5.2e-16-

oih:OB2012 pf:DUF3912 pf:HHH_5 pf:HHH_4 pf:DUF5700 pf:DUF815 pf:AAA_30 pf:RsgA_GTPase pf:AAA_11 pf:UvrD-helicase pf:AAA_19 pf:DEAD pf:AAA_29 pf:nSTAND3 pf:T2SSE pf:Zeta_toxin pf:TsaE pf:AAA_7 pf:AAA_14 pf:AAA_22 pf:Rad17 pf:TrwB_AAD_bind pf:AAA_16 pf:SLFN-g3_helicase pf:NACHT pf:AAA pf:AAA_5 pf:Viral_helicase1 pf:AAA_18 pf:AAA_28 pf:UvrD_C pf:SH3_13 pf:DUF4926 pf:AAA_12 pf:Viral_helicase1 pf:UvrD_C_2


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