SSDB Motif Search Result


Organism : Oceanobacillus iheyensis
Gene : OB2012
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) conjugation transfer protein
Motif idFromToDefinitionE valueScore
pf:OB_YrrC1692 1.3e-20-
pf:DUF39121953Protein of unknown function (DUF3912) 0.45-
pf:HHH_5109157Helix-hairpin-helix domain 0.03-
pf:HHH_RecD2157247 4.2e-28-
pf:DUF5700158201 0.25-
pf:DUF815326379Protein of unknown function (DUF815) 0.2-
pf:AAA_30339535AAA domain 8.8e-46-
pf:RsgA_GTPase340381 0.11-
pf:AAA_11341381AAA domain 0.00068-
pf:UvrD-helicase341412UvrD/REP helicase N-terminal domain 0.016-
pf:AAA_19343487AAA domain 1.3e-46-
pf:DEAD343413DEAD/DEAH box helicase 0.87-
pf:NPHP3_N344376 0.24-
pf:AAA_29344373P-loop containing region of AAA domain 0.57-
pf:nSTAND3345380 0.011-
pf:TsaE351379Threonylcarbamoyl adenosine biosynthesis protein TsaE 0.051-
pf:Zeta_toxin351392Zeta toxin 0.024-
pf:AAA_7352378P-loop containing dynein motor region D3 0.32-
pf:AAA_14353396AAA domain 0.32-
pf:AAA_22353477AAA domain 0.013-
pf:Rad17353391Rad17 cell cycle checkpoint protein 0.46-
pf:ABC_tran353392ABC transporter 0.52-
pf:TrwB_AAD_bind353377Type IV secretion-system coupling protein DNA-binding domain 0.21-
pf:AAA_16354378AAA ATPase domain 0.16-
pf:SLFN-g3_helicase354451 0.28-
pf:NACHT355401NACHT domain 0.48-
pf:AAA_28356373AAA domain 0.083-
pf:AAA356377ATPase family associated with various cellular activities (AAA) 0.033-
pf:AAA_5356380AAA domain (dynein-related subfamily) 0.67-
pf:Viral_helicase1357509Viral (Superfamily 1) RNA helicase 0.00051-
pf:UvrD_C585721UvrD-like helicase C-terminal domain 0.5-
pf:SH3_13587657 2.1e-20-
pf:DUF4926616644Domain of unknown function (DUF4926) 0.016-
pf:AAA_12651724AAA domain 0.14-
pf:Viral_helicase1672722Viral (Superfamily 1) RNA helicase 0.00075-
pf:UvrD_C_2674721UvrD-like helicase C-terminal domain 5.6e-16-
pf:YajR_YAM693739 0.81-

oih:OB2012 pf:OB_YrrC pf:DUF3912 pf:HHH_5 pf:HHH_RecD2 pf:DUF5700 pf:DUF815 pf:AAA_30 pf:RsgA_GTPase pf:AAA_11 pf:UvrD-helicase pf:AAA_19 pf:DEAD pf:NPHP3_N pf:AAA_29 pf:nSTAND3 pf:TsaE pf:Zeta_toxin pf:AAA_7 pf:AAA_14 pf:AAA_22 pf:Rad17 pf:ABC_tran pf:TrwB_AAD_bind pf:AAA_16 pf:SLFN-g3_helicase pf:NACHT pf:AAA_28 pf:AAA pf:AAA_5 pf:Viral_helicase1 pf:UvrD_C pf:SH3_13 pf:DUF4926 pf:AAA_12 pf:Viral_helicase1 pf:UvrD_C_2 pf:YajR_YAM

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