SSDB Motif Search Result
Organism :
Oceanobacillus iheyensis
Gene :
OB2012
Definition :
K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) conjugation transfer protein
Motif id
From
To
Definition
E value
Score
pf:DUF3912
19
53
Protein of unknown function (DUF3912)
0.39
-
pf:HHH_5
109
157
Helix-hairpin-helix domain
0.026
-
pf:HHH_4
157
247
Helix-hairpin-helix containing domain
3.8e-28
-
pf:DUF5700
164
201
0.37
-
pf:DUF815
331
379
Protein of unknown function (DUF815)
0.21
-
pf:AAA_30
339
535
AAA domain
2.2e-45
-
pf:RsgA_GTPase
340
382
0.099
-
pf:AAA_11
341
381
AAA domain
0.00058
-
pf:UvrD-helicase
341
412
UvrD/REP helicase N-terminal domain
0.014
-
pf:AAA_19
343
487
AAA domain
2.4e-47
-
pf:DEAD
343
414
DEAD/DEAH box helicase
0.66
-
pf:AAA_29
344
372
P-loop containing region of AAA domain
0.44
-
pf:nSTAND3
345
380
0.0092
-
pf:T2SSE
345
376
Type II/IV secretion system protein
0.13
-
pf:Zeta_toxin
351
392
Zeta toxin
0.0055
-
pf:TsaE
351
379
Threonylcarbamoyl adenosine biosynthesis protein TsaE
0.049
-
pf:AAA_7
352
378
P-loop containing dynein motor region D3
0.27
-
pf:AAA_14
353
397
AAA domain
0.3
-
pf:AAA_22
353
477
AAA domain
0.011
-
pf:Rad17
353
391
Rad17 cell cycle checkpoint protein
0.39
-
pf:TrwB_AAD_bind
353
377
Type IV secretion-system coupling protein DNA-binding domain
0.18
-
pf:AAA_16
354
378
AAA ATPase domain
0.13
-
pf:SLFN-g3_helicase
354
384
0.64
-
pf:NACHT
355
401
NACHT domain
0.41
-
pf:AAA
356
377
ATPase family associated with various cellular activities (AAA)
0.029
-
pf:AAA_5
356
380
AAA domain (dynein-related subfamily)
0.58
-
pf:Viral_helicase1
357
509
Viral (Superfamily 1) RNA helicase
0.00044
-
pf:AAA_18
357
394
AAA domain
0.2
-
pf:AAA_28
357
373
AAA domain
0.096
-
pf:UvrD_C
585
721
UvrD-like helicase C-terminal domain
0.43
-
pf:SH3_13
587
657
2.6e-20
-
pf:DUF4926
616
645
Domain of unknown function (DUF4926)
0.013
-
pf:AAA_12
638
724
AAA domain
0.092
-
pf:Viral_helicase1
672
722
Viral (Superfamily 1) RNA helicase
0.00065
-
pf:UvrD_C_2
674
722
UvrD-like helicase C-terminal domain
5.2e-16
-
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