| Motif id | From | To | Definition | E value | Score |
| pf:zf-UBP_var | 19 | 85 | | 5.2e-07 | - |
| pf:zf-UBP | 189 | 263 | Zn-finger in ubiquitin-hydrolases and other protein
| 6.6e-11 | - |
| pf:UCH | 323 | 849 | Ubiquitin carboxyl-terminal hydrolase
| 1.5e-44 | - |
| pf:NusG | 573 | 623 | Transcription termination factor nusG
| 0.12 | - |
| pf:UBA_3 | 677 | 707 | Fungal ubiquitin-associated domain
| 0.00027 | - |
| pf:UBA_7 | 679 | 714 | | 0.11 | - |
| pf:UBA_7 | 733 | 774 | | 0.00074 | - |