SSDB Motif Search Result
Organism :
Paenibacillus sp. JDR-2
Gene :
Pjdr2_1027
Definition :
K01990 ABC-2 type transport system ATP-binding protein | (GenBank) ABC transporter related
Motif id
From
To
Definition
E value
Score
pf:ABC_tran
22
161
ABC transporter
1.1e-32
-
pf:AAA_29
22
53
P-loop containing region of AAA domain
0.0097
-
pf:MeaB
22
55
0.35
-
pf:AAA_23
23
52
AAA domain
0.009
-
pf:AAA_16
31
58
AAA ATPase domain
0.52
-
pf:RsgA_GTPase
33
54
0.23
-
pf:AAA_30
34
84
AAA domain
0.016
-
pf:AAA_21
35
56
AAA domain, putative AbiEii toxin, Type IV TA system
0.54
-
pf:MobB
35
55
Molybdopterin guanine dinucleotide synthesis protein B
0.045
-
pf:DO-GTPase2
35
53
0.09
-
pf:cobW
35
66
CobW/HypB/UreG, nucleotide-binding domain
0.076
-
pf:Aq_aa27
35
60
0.21
-
pf:GTP_EFTU
35
55
Elongation factor Tu GTP binding domain
0.43
-
pf:nSTAND3
36
76
0.042
-
pf:AAA_2
36
84
AAA domain (Cdc48 subfamily)
0.46
-
pf:AAA_22
37
59
AAA domain
0.034
-
pf:AAA_33
37
75
AAA domain
0.049
-
pf:AAA_18
37
53
AAA domain
0.27
-
pf:AAA_28
37
53
AAA domain
0.22
-
pf:AAA_5
37
110
AAA domain (dynein-related subfamily)
0.25
-
pf:Dynamin_N
37
56
Dynamin family
0.41
-
pf:SMC_N
96
191
RecF/RecN/SMC N terminal domain
0.033
-
pf:AAA_21
138
194
AAA domain, putative AbiEii toxin, Type IV TA system
0.0074
-
pf:SbcC_Walker_B
149
175
0.41
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]