SSDB Motif Search Result


Organism : Prochlorococcus marinus MIT 9211
Gene : P9211_10841
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; possible exodeoxyribonuclease V 67 kD polypeptide
Motif idFromToDefinitionE valueScore
pf:DUF81599177Protein of unknown function (DUF815) 0.18-
pf:AAA_30137333AAA domain 2.3e-27-
pf:AAA_11137204AAA domain 2.2e-06-
pf:UvrD-helicase138226UvrD/REP helicase N-terminal domain 0.0001-
pf:PhoH139173PhoH-like protein 0.26-
pf:AAA_19142288AAA domain 1e-32-
pf:AAA_7142206P-loop containing dynein motor region D3 0.02-
pf:nSTAND3145176 0.0054-
pf:AAA_16145174AAA ATPase domain 0.026-
pf:AAA_22152283AAA domain 0.0082-
pf:SLFN-g3_helicase154253 0.18-
pf:AAA_24155255AAA domain 0.016-
pf:AAA155181ATPase family associated with various cellular activities (AAA) 0.18-
pf:Viral_helicase1157318Viral (Superfamily 1) RNA helicase 0.00015-
pf:NAT10_TcmA_helicase157269 1.8e-05-
pf:AAA_11241287AAA domain 0.0004-
pf:SH3_13444479 0.00051-
pf:UvrD_C488564UvrD-like helicase C-terminal domain 0.00025-
pf:Viral_helicase1499565Viral (Superfamily 1) RNA helicase 0.013-
pf:UvrD_C_2507563UvrD-like helicase C-terminal domain 4.4e-09-

pmj:P9211_10841 pf:DUF815 pf:AAA_30 pf:AAA_11 pf:UvrD-helicase pf:PhoH pf:AAA_19 pf:AAA_7 pf:nSTAND3 pf:AAA_16 pf:AAA_22 pf:SLFN-g3_helicase pf:AAA_24 pf:AAA pf:Viral_helicase1 pf:NAT10_TcmA_helicase pf:AAA_11 pf:SH3_13 pf:UvrD_C pf:Viral_helicase1 pf:UvrD_C_2

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