| Motif id | From | To | Definition | E value | Score |
| pf:Dala_Dala_lig_N | 8 | 121 | D-ala D-ala ligase N-terminus
| 1.1e-28 | - |
| pf:GARS_A | 131 | 228 | Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
| 0.31 | - |
| pf:Dala_Dala_lig_C | 139 | 344 | D-ala D-ala ligase C-terminus
| 7.7e-66 | - |
| pf:RimK | 165 | 324 | RimK-like ATP-grasp domain
| 0.00045 | - |
| pf:ATP-grasp | 167 | 313 | ATP-grasp domain
| 1.4e-07 | - |
| pf:CPSase_L_D2 | 169 | 314 | Carbamoyl-phosphate synthase L chain, ATP binding domain
| 1.6e-07 | - |
| pf:ATP-grasp_4 | 174 | 227 | ATP-grasp domain
| 0.0014 | - |