SSDB Motif Search Result


Organism : Pediococcus pentosaceus ATCC 25745
Gene : PEPE_0689
Definition : K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] | (GenBank) DNA-(apurinic or apyrimidinic site) lyase
Motif idFromToDefinitionE valueScore
pf:Fapy_DNA_glyco1116Formamidopyrimidine-DNA glycosylase N-terminal domain 9.1e-39-
pf:H2TH133221Formamidopyrimidine-DNA glycosylase H2TH domain 6.7e-28-
pf:AddB_5th143158 0.8-
pf:Ribosomal_S13166215Ribosomal protein S13/S18 0.39-
pf:LIM239271LIM domain 0.22-
pf:DUF7573244271 0.35-
pf:zf-FPG_IleRS245272Zinc finger found in FPG and IleRS 1.2e-12-
pf:RNHCP246271RNHCP domain 0.98-
pf:Auto_anti-p27247272Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) 0.075-
pf:Zn_ribbon_6247274 0.11-
pf:DUF8512247272 0.4-
pf:HscB_4_cys248272 0.18-
pf:DZR248272Double zinc ribbon 0.22-
pf:Zn_ribbon_8248272 0.52-

ppe:PEPE_0689 pf:Fapy_DNA_glyco pf:H2TH pf:AddB_5th pf:Ribosomal_S13 pf:LIM pf:DUF7573 pf:zf-FPG_IleRS pf:RNHCP pf:Auto_anti-p27 pf:Zn_ribbon_6 pf:DUF8512 pf:HscB_4_cys pf:DZR pf:Zn_ribbon_8

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