SSDB Motif Search Result


Organism : Pseudomonas putida NBRC 14164
Gene : PP4_30630
Definition : K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ligD; DNA ligase D
Motif idFromToDefinitionE valueScore
pf:LigD_N38143DNA polymerase Ligase (LigD) 2e-44-
pf:DNA_ligase_A_M223393ATP dependent DNA ligase domain 9.5e-29-
pf:RNA_ligase227392RNA ligase 0.084-
pf:mRNA_cap_enzyme232341mRNA capping enzyme, catalytic domain 0.43-
pf:DNA_ligase_A_C412508ATP dependent DNA ligase C terminal region 2e-27-
pf:LigD_Prim-Pol552801 7.4e-84-
pf:DNA_primase_S652771DNA primase small subunit 1.1e-06-

ppun:PP4_30630 pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:mRNA_cap_enzyme pf:DNA_ligase_A_C pf:LigD_Prim-Pol pf:DNA_primase_S

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