SSDB Motif Search Result


Organism : Ramlibacter tataouinensis
Gene : Rta_04410
Definition : K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] | (GenBank) candidate histidine kinase, hybrid
Motif idFromToDefinitionE valueScore
pf:CheB_methylest33207CheB methylesterase 3.8e-51-
pf:CheR_N247307CheR methyltransferase, all-alpha domain 6.9e-16-
pf:CheR310498CheR methyltransferase, SAM binding domain 4.1e-49-
pf:PAS570661PAS fold 0.00049-
pf:Laminin_I689786Laminin Domain I 0.024-
pf:DUF745690789Protein of unknown function (DUF745) 0.074-
pf:CEP89691787 0.00024-
pf:AIP3692779Actin interacting protein 3 0.13-
pf:SPC25_N695794 0.00013-
pf:AAA_13695781AAA domain 0.047-
pf:CENP-F_leu_zip696790Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 9.4e-06-
pf:PII1_coiled_coil696795 9.1e-05-
pf:Mua696772 0.017-
pf:At4g38062_C696784 0.25-
pf:AAA_23696758AAA domain 0.36-
pf:Cytadherence_Hmw2696781 0.26-
pf:Snapin_Pallidin696766Snapin/Pallidin 0.68-
pf:IFT57697775Intra-flagellar transport protein 57 0.0042-
pf:CCDC160697782 0.27-
pf:Exonuc_VII_L697780Exonuclease VII, large subunit 0.07-
pf:DUF1664698766Protein of unknown function (DUF1664) 0.19-
pf:CLIP1698770 0.31-
pf:APG6_N698771 0.44-
pf:Wtap699801WTAP/Mum2p family 0.059-
pf:CCDC89699780 0.21-
pf:Sec20700756Sec20 0.049-
pf:FapA700780 0.068-
pf:CCDC113_CCDC96_CC700765 0.096-
pf:Uso1_p115_C700778Uso1 / p115 like vesicle tethering protein, C terminal region 0.25-
pf:CCDC39701786 0.0045-
pf:LEKR1701772 0.0046-
pf:CCDC18_2nd701782 0.058-
pf:CCDC192701774 0.16-
pf:GAS701772Growth-arrest specific micro-tubule binding 0.16-
pf:HAUS-augmin3701776HAUS augmin-like complex subunit 3 0.35-
pf:CEP152_CC1701783 0.55-
pf:ATG14701781 0.28-
pf:Fez1701778Fez1 0.07-
pf:T4SS_LegC2C7702789 0.0023-
pf:TelA702775Toxic anion resistance protein (TelA) 0.091-
pf:DUF3450702761Protein of unknown function (DUF3450) 0.054-
pf:ZK652702782 0.28-
pf:Spc7702759Spc7 kinetochore protein 0.38-
pf:HMMR_N704780Hyaluronan mediated motility receptor N-terminal 0.092-
pf:Mod_r704775Modifier of rudimentary (Mod(r)) protein 0.96-
pf:Sec8_N706780 0.071-
pf:EXOC6_Sec15_N709786 0.55-
pf:TPR_MLP1_2711784TPR/MLP1/MLP2-like protein 0.22-
pf:Syntaxin711778Syntaxin 0.61-
pf:DUF6674717772 0.26-
pf:zf-C4H2721784Zinc finger-containing protein 0.55-
pf:Fusion_gly727762Fusion glycoprotein F0 0.35-
pf:PAS_10780884PAS domain 7.7e-26-
pf:PAS_4786887PAS fold 2.2e-07-
pf:PAS_8896945PAS domain 0.017-
pf:PAS8971003PAS fold 1.5e-14-
pf:PAS_49011008PAS fold 5.2e-17-
pf:PAS_99051005PAS domain 6.4e-13-
pf:PAS_3917995PAS fold 1.2e-07-
pf:PAS10181130PAS fold 3.6e-10-
pf:PAS_810181072PAS domain 1.5e-05-
pf:PAS_410291136PAS fold 2.4e-10-
pf:PAS_910311133PAS domain 1e-12-
pf:PAS_710311138PAS fold 0.0057-
pf:PAS_310421127PAS fold 0.00081-
pf:HisKA11681232His Kinase A (phospho-acceptor) domain 8.2e-17-
pf:HATPase_c12811392Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 3.9e-26-
pf:HATPase_c_212881362Histidine kinase-like ATPase domain 0.0011-
pf:HATPase_c_313021358Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 0.003-
pf:VpsR14201485 0.046-
pf:Response_reg14211531Response regulator receiver domain 5.5e-18-
pf:PDE8A_N14331504 0.3-

rta:Rta_04410 pf:CheB_methylest pf:CheR_N pf:CheR pf:PAS pf:Laminin_I pf:DUF745 pf:CEP89 pf:AIP3 pf:SPC25_N pf:AAA_13 pf:CENP-F_leu_zip pf:PII1_coiled_coil pf:Mua pf:At4g38062_C pf:AAA_23 pf:Cytadherence_Hmw2 pf:Snapin_Pallidin pf:IFT57 pf:CCDC160 pf:Exonuc_VII_L pf:DUF1664 pf:CLIP1 pf:APG6_N pf:Wtap pf:CCDC89 pf:Sec20 pf:FapA pf:CCDC113_CCDC96_CC pf:Uso1_p115_C pf:CCDC39 pf:LEKR1 pf:CCDC18_2nd pf:CCDC192 pf:GAS pf:HAUS-augmin3 pf:CEP152_CC1 pf:ATG14 pf:Fez1 pf:T4SS_LegC2C7 pf:TelA pf:DUF3450 pf:ZK652 pf:Spc7 pf:HMMR_N pf:Mod_r pf:Sec8_N pf:EXOC6_Sec15_N pf:TPR_MLP1_2 pf:Syntaxin pf:DUF6674 pf:zf-C4H2 pf:Fusion_gly pf:PAS_10 pf:PAS_4 pf:PAS_8 pf:PAS pf:PAS_4 pf:PAS_9 pf:PAS_3 pf:PAS pf:PAS_8 pf:PAS_4 pf:PAS_9 pf:PAS_7 pf:PAS_3 pf:HisKA pf:HATPase_c pf:HATPase_c_2 pf:HATPase_c_3 pf:VpsR pf:Response_reg pf:PDE8A_N

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