SSDB Motif Search Result


Organism : Shewanella baltica OS223
Gene : Sbal223_0593
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) AAA ATPase
Motif idFromToDefinitionE valueScore
pf:HHH_4172253Helix-hairpin-helix containing domain 2.1e-13-
pf:DUF2935245305Domain of unknown function (DUF2935) 0.25-
pf:AAA_30340514AAA domain 3.8e-40-
pf:AAA_11340378AAA domain 0.015-
pf:PhoH340409PhoH-like protein 0.015-
pf:UvrD-helicase340403UvrD/REP helicase N-terminal domain 0.0011-
pf:nSTAND3341388 0.006-
pf:T2SSE341377Type II/IV secretion system protein 0.12-
pf:AAA_19344466AAA domain 2.1e-30-
pf:AAA_14355457AAA domain 0.0008-
pf:SLFN-g3_helicase355390 0.27-
pf:AAA_22356461AAA domain 0.0049-
pf:PIF1356477PIF1-like helicase 0.0028-
pf:AAA358432ATPase family associated with various cellular activities (AAA) 0.035-
pf:AAA_16358394AAA ATPase domain 0.024-
pf:AAA_28358378AAA domain 0.16-
pf:Viral_helicase1359464Viral (Superfamily 1) RNA helicase 2e-07-
pf:Helicase_RecD415448Helicase 0.0063-
pf:AAA_11417465AAA domain 0.0087-
pf:SH3_13556612 2.8e-06-
pf:Viral_helicase1634688Viral (Superfamily 1) RNA helicase 2.7e-05-
pf:UvrD_C_2643688UvrD-like helicase C-terminal domain 8.7e-11-
pf:Herpes_Helicase644715Helicase 0.45-

sbp:Sbal223_0593 pf:HHH_4 pf:DUF2935 pf:AAA_30 pf:AAA_11 pf:PhoH pf:UvrD-helicase pf:nSTAND3 pf:T2SSE pf:AAA_19 pf:AAA_14 pf:SLFN-g3_helicase pf:AAA_22 pf:PIF1 pf:AAA pf:AAA_16 pf:AAA_28 pf:Viral_helicase1 pf:Helicase_RecD pf:AAA_11 pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:Herpes_Helicase

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