SSDB Motif Search Result
Organism :
Staphylococcus epidermidis ATCC 12228
Gene :
SE_p411
Definition :
no KO assigned | (GenBank) resolvase/integrase
Motif id
From
To
Definition
E value
Score
pf:Resolvase
1
104
Resolvase, N terminal domain
6.9e-33
-
pf:HTH_32
97
147
Homeodomain-like domain
0.099
-
pf:HTH_7
106
149
Helix-turn-helix domain of resolvase
2.8e-18
-
pf:HTH_50
109
148
0.14
-
pf:HTH_Mga
110
151
M protein trans-acting positive regulator (MGA) HTH domain
0.26
-
pf:HTH_24
111
151
Winged helix-turn-helix DNA-binding
0.0013
-
pf:MarR
111
151
MarR family
0.17
-
pf:WHD_RuvB
111
144
0.32
-
pf:UPF0122
112
152
Putative helix-turn-helix protein, YlxM / p13 like
0.17
-
pf:HTH_AsnC-type
113
150
AsnC-type helix-turn-helix domain
0.23
-
pf:Mga
115
152
Mga helix-turn-helix domain
0.016
-
pf:Trp_repressor
116
156
Trp repressor protein
0.035
-
pf:HTH_5
116
153
Bacterial regulatory protein, arsR family
0.1
-
pf:HTH_11
117
152
HTH domain
6.1e-06
-
pf:TrmB
117
152
Sugar-specific transcriptional regulator TrmB
0.0035
-
pf:HVO_A0261_N
117
152
0.069
-
pf:HTH_IclR
117
151
IclR helix-turn-helix domain
0.32
-
pf:HTH_22
118
148
HTH domain
0.0012
-
pf:HTH_69
118
153
0.15
-
pf:HTH_38
119
147
Helix-turn-helix domain
0.029
-
pf:TnsD
119
156
Tn7-like transposition protein D
0.049
-
pf:Terminase_5
120
151
Putative ATPase subunit of terminase (gpP-like)
0.12
-
pf:HTH_40
121
153
Helix-turn-helix domain
0.014
-
pf:HTH_23
122
151
Homeodomain-like domain
8.6e-05
-
pf:HTH_29
122
152
Winged helix-turn helix
0.03
-
pf:HTH_28
122
152
Helix-turn-helix domain
0.037
-
pf:HTH_36
123
150
Helix-turn-helix domain
0.0048
-
pf:HTH_Tnp_IS630
124
158
Transposase
0.094
-
pf:TetR_N
126
146
Bacterial regulatory proteins, tetR family
0.25
-
pf:TnsB_2nd
128
149
0.16
-
pf:WHD_RecQ_mid_bact
128
154
0.3
-
pf:HTH_DeoR
129
153
DeoR-like helix-turn-helix domain
0.043
-
pf:HTH_Tnp_4
132
150
Helix-turn-helix of DDE superfamily endonuclease
0.3
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]