SSDB Motif Search Result


Organism : Staphylococcus epidermidis RP62A (MRSE)
Gene : SEA0002
Definition : K07498 putative transposase | (GenBank) truncated IS431mec-like transposase
Motif idFromToDefinitionE valueScore
pf:OYE-like_second_a-b1570 0.019-
pf:HTH_Tnp_42160Helix-turn-helix of DDE superfamily endonuclease 0.43-
pf:XPB_DRD2442 0.22-
pf:HTH_322550Homeodomain-like domain 0.039-
pf:DDE_Tnp_IS662596Transposase IS66 family 0.02-
pf:AJM1_C2755 0.49-
pf:Mu-transpos_M2853 0.14-
pf:HEM42864Uroporphyrinogen-III synthase HemD 0.53-
pf:DUF15803453Protein of unknown function (DUF1580) 0.23-
pf:HTH_234154Homeodomain-like domain 0.46-
pf:rve67158Integrase core domain 2.2e-15-
pf:DDE_Tnp_IS24072202DDE domain 6.9e-39-
pf:DDE_382142DDE superfamily endonuclease 0.15-
pf:DUF46092168Protein of unknown function (DUF460) 0.24-
pf:Cauli_DNA-bind131181Caulimovirus DNA-binding protein 0.019-
pf:DYW_deaminase139169DYW family of nucleic acid deaminases 0.81-

ser:SEA0002 pf:OYE-like_second_a-b pf:HTH_Tnp_4 pf:XPB_DRD pf:HTH_32 pf:DDE_Tnp_IS66 pf:AJM1_C pf:Mu-transpos_M pf:HEM4 pf:DUF1580 pf:HTH_23 pf:rve pf:DDE_Tnp_IS240 pf:DDE_3 pf:DUF460 pf:Cauli_DNA-bind pf:DYW_deaminase

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