SSDB Motif Search Result


Organism : Staphylococcus epidermidis RP62A (MRSE)
Gene : SEA0021
Definition : K07498 putative transposase | (GenBank) truncated IS431mec-like transposase
Motif idFromToDefinitionE valueScore
pf:DDE_Tnp_IS66880Transposase IS66 family 0.019-
pf:HTH_32934Homeodomain-like domain 0.041-
pf:XPB_DRD926 0.26-
pf:AJM1_C1039 0.35-
pf:Mu-transpos_M1137 0.13-
pf:HEM41348Uroporphyrinogen-III synthase HemD 0.59-
pf:DUF15801837Protein of unknown function (DUF1580) 0.22-
pf:HTH_232538Homeodomain-like domain 0.45-
pf:HTH_Tnp_42544Helix-turn-helix of DDE superfamily endonuclease 0.61-
pf:rve51142Integrase core domain 2e-15-
pf:DDE_Tnp_IS24056186DDE domain 6.4e-39-
pf:DDE_366126DDE superfamily endonuclease 0.13-
pf:DUF46076152Protein of unknown function (DUF460) 0.22-
pf:Cauli_DNA-bind115165Caulimovirus DNA-binding protein 0.018-
pf:DYW_deaminase123153DYW family of nucleic acid deaminases 0.81-

ser:SEA0021 pf:DDE_Tnp_IS66 pf:HTH_32 pf:XPB_DRD pf:AJM1_C pf:Mu-transpos_M pf:HEM4 pf:DUF1580 pf:HTH_23 pf:HTH_Tnp_4 pf:rve pf:DDE_Tnp_IS240 pf:DDE_3 pf:DUF460 pf:Cauli_DNA-bind pf:DYW_deaminase

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