SSDB Motif Search Result


Organism : Staphylococcus epidermidis RP62A (MRSE)
Gene : SERP0249
Definition : K07498 putative transposase | (GenBank) IS431mec-like transposase
Motif idFromToDefinitionE valueScore
pf:OYE-like_second_a-b1572 0.012-
pf:HTH_Tnp_42160Helix-turn-helix of DDE superfamily endonuclease 0.18-
pf:XPB_DRD2442 0.23-
pf:HTH_322550Homeodomain-like domain 0.034-
pf:DDE_Tnp_IS662590Transposase IS66 family 0.098-
pf:AJM1_C2755 0.44-
pf:Mu-transpos_M2853 0.047-
pf:HEM42863Uroporphyrinogen-III synthase HemD 0.22-
pf:DUF15803453Protein of unknown function (DUF1580) 0.29-
pf:HTH_234154Homeodomain-like domain 0.16-
pf:rve67158Integrase core domain 2.3e-11-
pf:DDE_Tnp_IS24072202DDE domain 6.4e-36-
pf:RSA-1_N109156 0.32-
pf:Cauli_DNA-bind128181Caulimovirus DNA-binding protein 0.1-

ser:SERP0249 pf:OYE-like_second_a-b pf:HTH_Tnp_4 pf:XPB_DRD pf:HTH_32 pf:DDE_Tnp_IS66 pf:AJM1_C pf:Mu-transpos_M pf:HEM4 pf:DUF1580 pf:HTH_23 pf:rve pf:DDE_Tnp_IS240 pf:RSA-1_N pf:Cauli_DNA-bind

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