SSDB Motif Search Result


Organism : Staphylococcus epidermidis RP62A (MRSE)
Gene : SERP0341
Definition : K16012 ATP-binding cassette, subfamily C, bacterial CydC | (GenBank) ABC transporter, ATP-binding protein, MsbA family
Motif idFromToDefinitionE valueScore
pf:ABC_membrane13282ABC transporter transmembrane region 3.9e-14-
pf:DUF4750143170Domain of unknown function (DUF4750) 0.86-
pf:DUF2207_C188282 0.23-
pf:RsgA_GTPase308389 4.5e-05-
pf:ABC_tran347488ABC transporter 3.2e-29-
pf:AAA_29352374P-loop containing region of AAA domain 0.00068-
pf:AAA_23357375AAA domain 0.33-
pf:nSTAND1358375 0.22-
pf:nSTAND3359404 0.15-
pf:MMR_HSR135938050S ribosome-binding GTPase 0.19-
pf:DUF87359378Domain of unknown function DUF87 0.85-
pf:T2SSE359384Type II/IV secretion system protein 0.35-
pf:AAA_28359377AAA domain 0.64-
pf:AAA_22360485AAA domain 0.023-
pf:AAA_18360379AAA domain 0.85-
pf:AAA_14360412AAA domain 0.58-
pf:AAA_30360389AAA domain 0.82-
pf:AAA_16360378AAA ATPase domain 0.38-
pf:AAA_21361389AAA domain, putative AbiEii toxin, Type IV TA system 0.024-
pf:AAA_33361378AAA domain 0.25-
pf:RPGR1_C398453 0.18-
pf:SMC_N419526RecF/RecN/SMC N terminal domain 1.6e-05-
pf:AAA_21442519AAA domain, putative AbiEii toxin, Type IV TA system 6.2e-05-

ser:SERP0341 pf:ABC_membrane pf:DUF4750 pf:DUF2207_C pf:RsgA_GTPase pf:ABC_tran pf:AAA_29 pf:AAA_23 pf:nSTAND1 pf:nSTAND3 pf:MMR_HSR1 pf:DUF87 pf:T2SSE pf:AAA_28 pf:AAA_22 pf:AAA_18 pf:AAA_14 pf:AAA_30 pf:AAA_16 pf:AAA_21 pf:AAA_33 pf:RPGR1_C pf:SMC_N pf:AAA_21

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