| Motif id | From | To | Definition | E value | Score |
| pf:ABC_tran | 20 | 195 | ABC transporter
| 2.3e-28 | - |
| pf:AAA_29 | 21 | 46 | P-loop containing region of AAA domain
| 0.074 | - |
| pf:ATP-synt_ab | 23 | 51 | ATP synthase alpha/beta family, nucleotide-binding domain
| 0.82 | - |
| pf:DLIC | 27 | 59 | Dynein light intermediate chain (DLIC)
| 0.27 | - |
| pf:RsgA_GTPase | 30 | 63 | | 0.38 | - |
| pf:MMR_HSR1 | 31 | 78 | 50S ribosome-binding GTPase
| 0.026 | - |
| pf:NB-ARC | 31 | 52 | NB-ARC domain
| 0.74 | - |
| pf:SMC_N | 32 | 236 | RecF/RecN/SMC N terminal domain
| 3.5e-08 | - |
| pf:Dynamin_N | 32 | 134 | Dynamin family
| 0.0028 | - |
| pf:AAA_21 | 33 | 102 | AAA domain, putative AbiEii toxin, Type IV TA system
| 0.00044 | - |
| pf:DUF5329 | 94 | 133 | | 0.53 | - |
| pf:AAA_21 | 163 | 227 | AAA domain, putative AbiEii toxin, Type IV TA system
| 0.02 | - |
| pf:ABC_tran_Xtn | 236 | 318 | ABC transporter
| 6e-22 | - |
| pf:DUF87 | 341 | 387 | Domain of unknown function DUF87
| 0.036 | - |
| pf:ABC_tran | 348 | 475 | ABC transporter
| 3.6e-21 | - |
| pf:ATP-synt_ab | 352 | 388 | ATP synthase alpha/beta family, nucleotide-binding domain
| 0.0038 | - |
| pf:RsgA_GTPase | 352 | 380 | | 0.075 | - |
| pf:SMC_N | 353 | 375 | RecF/RecN/SMC N terminal domain
| 0.35 | - |
| pf:TsaE | 354 | 378 | Threonylcarbamoyl adenosine biosynthesis protein TsaE
| 0.77 | - |
| pf:AAA_19 | 354 | 383 | AAA domain
| 0.3 | - |
| pf:AAA_29 | 355 | 373 | P-loop containing region of AAA domain
| 0.097 | - |
| pf:RuvB_N | 356 | 378 | Holliday junction DNA helicase ruvB N-terminus
| 0.078 | - |
| pf:MMR_HSR1 | 357 | 381 | 50S ribosome-binding GTPase
| 0.14 | - |
| pf:AAA_22 | 357 | 488 | AAA domain
| 8.3e-05 | - |
| pf:NB-ARC | 357 | 386 | NB-ARC domain
| 0.014 | - |
| pf:NTPase_1 | 357 | 381 | NTPase
| 0.079 | - |
| pf:AAA_16 | 357 | 388 | AAA ATPase domain
| 0.11 | - |
| pf:nSTAND3 | 357 | 386 | | 0.12 | - |
| pf:AAA_24 | 357 | 377 | AAA domain
| 0.13 | - |
| pf:ATPase_2 | 358 | 446 | ATPase domain predominantly from Archaea
| 2.1e-05 | - |
| pf:NACHT | 358 | 378 | NACHT domain
| 0.07 | - |
| pf:AAA_28 | 358 | 380 | AAA domain
| 0.019 | - |
| pf:AAA_18 | 358 | 392 | AAA domain
| 0.11 | - |
| pf:Roc | 358 | 416 | Ras of Complex, Roc, domain of DAPkinase
| 0.031 | - |
| pf:cobW | 358 | 389 | CobW/HypB/UreG, nucleotide-binding domain
| 0.11 | - |
| pf:AAA_14 | 358 | 415 | AAA domain
| 0.014 | - |
| pf:SRP54 | 358 | 388 | SRP54-type protein, GTPase domain
| 0.23 | - |
| pf:AAA_23 | 358 | 375 | AAA domain
| 0.13 | - |
| pf:AAA_21 | 359 | 375 | AAA domain, putative AbiEii toxin, Type IV TA system
| 0.0078 | - |
| pf:AAA_30 | 359 | 391 | AAA domain
| 0.018 | - |
| pf:NPHP3_N | 359 | 422 | | 0.93 | - |
| pf:AAA | 360 | 378 | ATPase family associated with various cellular activities (AAA)
| 0.044 | - |
| pf:SMC_N | 438 | 513 | RecF/RecN/SMC N terminal domain
| 0.0063 | - |
| pf:AAA_21 | 444 | 506 | AAA domain, putative AbiEii toxin, Type IV TA system
| 0.0004 | - |
| pf:DUF7310 | 560 | 600 | | 0.55 | - |
| pf:Par-4_C | 571 | 609 | | 0.032 | - |
| pf:ABC_tran_CTD | 576 | 642 | ABC transporter C-terminal domain
| 3.8e-13 | - |
| pf:DASH_Hsk3 | 580 | 604 | DASH complex subunit Hsk3 like
| 0.21 | - |