SSDB Motif Search Result


Organism : Shigella flexneri 2002017 (serotype Fxv)
Gene : SFxv_3636
Definition : K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] | (GenBank) rsmB; Ribosomal RNA small subunit methyltransferase B
Motif idFromToDefinitionE valueScore
pf:NusB13134NusB family 1.4e-28-
pf:BSH_CusB17135 0.25-
pf:RsmF-B_ferredox152225 2.3e-30-
pf:Methyltransf_37232338 6.5e-06-
pf:Methyltransf_5243329MraW methylase family 0.0092-
pf:Methyltr_RsmB-F24643316S rRNA methyltransferase RsmB/F 7.1e-81-
pf:MTS246332Methyltransferase small domain 0.0031-
pf:Ubie_methyltran246303ubiE/COQ5 methyltransferase family 0.21-
pf:TRM5-TYW2_MTfase252338 0.69-
pf:Methyltransf_31253389Methyltransferase domain 1.3e-06-
pf:FtsJ253378FtsJ-like methyltransferase 1.9e-05-
pf:Cons_hypoth95253337Conserved hypothetical protein 95 0.041-
pf:Methyltransf_15255310RNA cap guanine-N2 methyltransferase 0.022-
pf:Methyltransf_25257328Methyltransferase domain 2.7e-05-

sfe:SFxv_3636 pf:NusB pf:BSH_CusB pf:RsmF-B_ferredox pf:Methyltransf_37 pf:Methyltransf_5 pf:Methyltr_RsmB-F pf:MTS pf:Ubie_methyltran pf:TRM5-TYW2_MTfase pf:Methyltransf_31 pf:FtsJ pf:Cons_hypoth95 pf:Methyltransf_15 pf:Methyltransf_25

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