SSDB Motif Search Result


Organism : Streptomyces griseus
Gene : SGR_4825
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) putative exodeoxyribonuclease V
Motif idFromToDefinitionE valueScore
pf:HHH_594142Helix-hairpin-helix domain 3.3e-07-
pf:HHH_496141Helix-hairpin-helix containing domain 0.007-
pf:HHH_4144234Helix-hairpin-helix containing domain 4.4e-33-
pf:AAA_30335514AAA domain 5.1e-42-
pf:PhoH337405PhoH-like protein 0.12-
pf:UvrD-helicase337396UvrD/REP helicase N-terminal domain 0.57-
pf:AAA_11338396AAA domain 0.00027-
pf:DEAD338445DEAD/DEAH box helicase 0.066-
pf:AAA_19340469AAA domain 8.4e-43-
pf:nSTAND3341382 0.056-
pf:DUF87347383Domain of unknown function DUF87 0.17-
pf:PIF1349447PIF1-like helicase 0.004-
pf:AAA_22350449AAA domain 0.00011-
pf:SLFN-g3_helicase350436 0.29-
pf:AAA_16351465AAA ATPase domain 0.014-
pf:TrwB_AAD_bind351389Type IV secretion-system coupling protein DNA-binding domain 0.21-
pf:ABC_tran351384ABC transporter 0.34-
pf:NACHT352378NACHT domain 0.96-
pf:Viral_helicase1354467Viral (Superfamily 1) RNA helicase 0.013-
pf:Helicase_RecD354449Helicase 0.013-
pf:AAA354383ATPase family associated with various cellular activities (AAA) 0.24-
pf:HTH_IclR390409IclR helix-turn-helix domain 0.47-
pf:AAA_11426468AAA domain 0.22-
pf:SH3_13573638 2.3e-17-
pf:Viral_helicase1655706Viral (Superfamily 1) RNA helicase 6e-05-
pf:UvrD_C_2658706UvrD-like helicase C-terminal domain 7.4e-21-
pf:UvrD_C662706UvrD-like helicase C-terminal domain 0.041-

sgr:SGR_4825 pf:HHH_5 pf:HHH_4 pf:HHH_4 pf:AAA_30 pf:PhoH pf:UvrD-helicase pf:AAA_11 pf:DEAD pf:AAA_19 pf:nSTAND3 pf:DUF87 pf:PIF1 pf:AAA_22 pf:SLFN-g3_helicase pf:AAA_16 pf:TrwB_AAD_bind pf:ABC_tran pf:NACHT pf:Viral_helicase1 pf:Helicase_RecD pf:AAA pf:HTH_IclR pf:AAA_11 pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C

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