SSDB Motif Search Result


Organism : Streptosporangium roseum
Gene : Sros_4487
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) Exodeoxyribonuclease V
Motif idFromToDefinitionE valueScore
pf:OB_YrrC1285 1.2e-24-
pf:HHH_5100144Helix-hairpin-helix domain 3.2e-08-
pf:HHH100113Helix-hairpin-helix motif 0.12-
pf:HHH_3100140Helix-hairpin-helix motif 0.88-
pf:HHH_RecD2102144 0.0033-
pf:HHH_RecD2150240 4.8e-35-
pf:AAA_30339517AAA domain 2.5e-40-
pf:AAA_11341399AAA domain 0.0013-
pf:PhoH341410PhoH-like protein 0.25-
pf:AAA_19343472AAA domain 8.2e-42-
pf:nSTAND3351385 0.29-
pf:AAA_22354449AAA domain 0.00036-
pf:AAA_16354486AAA ATPase domain 0.029-
pf:NPHP3_N354384 0.14-
pf:SLFN-g3_helicase354441 0.17-
pf:ABC_tran354385ABC transporter 0.87-
pf:PIF1355450PIF1-like helicase 0.0072-
pf:TrwB_AAD_bind355393Type IV secretion-system coupling protein DNA-binding domain 0.21-
pf:Viral_helicase1357471Viral (Superfamily 1) RNA helicase 0.0053-
pf:NAT10_TcmA_helicase357452 0.021-
pf:AAA357383ATPase family associated with various cellular activities (AAA) 0.41-
pf:TraI_hel_assoc_N370461 0.22-
pf:SH3_13576641 4e-18-
pf:Viral_helicase1598709Viral (Superfamily 1) RNA helicase 2.1e-05-
pf:UvrD_C_2661709UvrD-like helicase C-terminal domain 1.3e-19-
pf:UvrD_C666709UvrD-like helicase C-terminal domain 0.65-

sro:Sros_4487 pf:OB_YrrC pf:HHH_5 pf:HHH pf:HHH_3 pf:HHH_RecD2 pf:HHH_RecD2 pf:AAA_30 pf:AAA_11 pf:PhoH pf:AAA_19 pf:nSTAND3 pf:AAA_22 pf:AAA_16 pf:NPHP3_N pf:SLFN-g3_helicase pf:ABC_tran pf:PIF1 pf:TrwB_AAD_bind pf:Viral_helicase1 pf:NAT10_TcmA_helicase pf:AAA pf:TraI_hel_assoc_N pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C

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