SSDB Motif Search Result
Organism :
Staphylococcus saprophyticus
Gene :
SSP1142
Definition :
K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) ATP-dependent exonuclease V alpha subunit
Motif id
From
To
Definition
E value
Score
pf:OB_YrrC
11
87
2.8e-24
-
pf:HHH_5
103
150
Helix-hairpin-helix domain
0.0034
-
pf:HHH_RecD2
104
150
0.18
-
pf:HHH_RecD2
153
243
1.1e-29
-
pf:DUF3297
204
226
Protein of unknown function (DUF3297)
0.66
-
pf:RPW8
237
326
Arabidopsis broad-spectrum mildew resistance protein RPW8
0.082
-
pf:DUF815
325
379
Protein of unknown function (DUF815)
0.18
-
pf:T2SSE
335
376
Type II/IV secretion system protein
0.068
-
pf:Mg_chelatase
337
380
Magnesium chelatase, subunit ChlI
0.17
-
pf:AAA_30
339
545
AAA domain
2.4e-47
-
pf:AAA_11
340
378
AAA domain
7.8e-05
-
pf:RsgA_GTPase
341
374
0.43
-
pf:AAA_19
343
486
AAA domain
7e-43
-
pf:nSTAND3
343
379
0.018
-
pf:NB-ARC
345
382
NB-ARC domain
0.14
-
pf:NPHP3_N
347
376
0.11
-
pf:TsaE
348
376
Threonylcarbamoyl adenosine biosynthesis protein TsaE
0.16
-
pf:Zeta_toxin
349
376
Zeta toxin
0.52
-
pf:AAA_29
351
375
P-loop containing region of AAA domain
0.2
-
pf:Rad17
352
374
Rad17 cell cycle checkpoint protein
0.34
-
pf:AAA_14
353
394
AAA domain
0.45
-
pf:ABC_tran
353
382
ABC transporter
0.28
-
pf:AAA_22
354
478
AAA domain
0.0014
-
pf:AAA_16
354
390
AAA ATPase domain
0.11
-
pf:SLFN-g3_helicase
354
450
0.18
-
pf:AAA
356
388
ATPase family associated with various cellular activities (AAA)
0.02
-
pf:AAA_18
357
398
AAA domain
0.23
-
pf:AAA_28
357
373
AAA domain
0.16
-
pf:Viral_helicase1
358
484
Viral (Superfamily 1) RNA helicase
0.06
-
pf:AAA_17
359
377
AAA domain
0.46
-
pf:SH3_13
585
655
2.7e-19
-
pf:Viral_helicase1
660
720
Viral (Superfamily 1) RNA helicase
0.0058
-
pf:UvrD_C_2
672
719
UvrD-like helicase C-terminal domain
4.6e-15
-
pf:AAA_12
673
723
AAA domain
0.068
-
pf:UvrD_C
677
719
UvrD-like helicase C-terminal domain
0.66
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]