SSDB Motif Search Result


Organism : Sulfurimonas denitrificans
Gene : Suden_1852
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) ATPase
Motif idFromToDefinitionE valueScore
pf:OB_YrrC369 5.5e-05-
pf:HHH_588134Helix-hairpin-helix domain 0.073-
pf:HHH_RecD2136226 2.6e-20-
pf:T2SSE308362Type II/IV secretion system protein 0.028-
pf:ResIII310361Type III restriction enzyme, res subunit 0.14-
pf:AAA_30312497AAA domain 6.8e-33-
pf:PIF1312440PIF1-like helicase 3.6e-08-
pf:AAA_11312371AAA domain 0.0054-
pf:PhoH314344PhoH-like protein 0.21-
pf:Mg_chelatase314370Magnesium chelatase, subunit ChlI 0.14-
pf:AAA_19316441AAA domain 4.6e-21-
pf:NB-ARC317356NB-ARC domain 0.087-
pf:AAA_16318437AAA ATPase domain 0.00028-
pf:NPHP3_N323358 0.012-
pf:AAA_22326418AAA domain 0.0034-
pf:SLFN-g3_helicase328437 0.34-
pf:AAA_14328412AAA domain 0.058-
pf:ABC_tran328353ABC transporter 0.77-
pf:AAA_5330422AAA domain (dynein-related subfamily) 0.016-
pf:AAA331444ATPase family associated with various cellular activities (AAA) 0.00049-
pf:AAA_2331418AAA domain (Cdc48 subfamily) 0.18-
pf:Viral_helicase1334520Viral (Superfamily 1) RNA helicase 2.8e-06-
pf:AAA_11391440AAA domain 0.11-
pf:SH3_13574650 6e-09-
pf:Viral_helicase1653720Viral (Superfamily 1) RNA helicase 0.00023-
pf:UvrD_C_2673720UvrD-like helicase C-terminal domain 5.9e-18-
pf:UvrD_C676718UvrD-like helicase C-terminal domain 0.028-
pf:AAA_12677723AAA domain 0.014-

tdn:Suden_1852 pf:OB_YrrC pf:HHH_5 pf:HHH_RecD2 pf:T2SSE pf:ResIII pf:AAA_30 pf:PIF1 pf:AAA_11 pf:PhoH pf:Mg_chelatase pf:AAA_19 pf:NB-ARC pf:AAA_16 pf:NPHP3_N pf:AAA_22 pf:SLFN-g3_helicase pf:AAA_14 pf:ABC_tran pf:AAA_5 pf:AAA pf:AAA_2 pf:Viral_helicase1 pf:AAA_11 pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C pf:AAA_12

[ GENES | KEGG2 | KEGG | GenomeNet ]