| Motif id | From | To | Definition | E value | Score |
| pf:Glycos_trans_3N | 5 | 24 | Glycosyl transferase family, helical bundle domain
| 0.44 | - |
| pf:FliM | 48 | 232 | Flagellar motor switch protein FliM
| 7e-48 | - |
| pf:SepQ_C | 245 | 300 | | 0.63 | - |
| pf:FliMN_C | 253 | 319 | Type III flagellar switch regulator (C-ring) FliN C-term
| 8.1e-23 | - |
| pf:FliMN_C_rel | 253 | 282 | | 0.052 | - |