SSDB Motif Search Result


Organism : Vibrio vulnificus CMCP6
Gene : VV1_2003
Definition : K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] | (GenBank) dnaX; DNA polymerase III, subunits gamma and tau
Motif idFromToDefinitionE valueScore
pf:RuvB_N1173Holliday junction DNA helicase ruvB N-terminus 8.3e-05-
pf:AAA_1618141AAA ATPase domain 1.7e-05-
pf:DNA_pol3_delta221178DNA polymerase III, delta subunit 6.3e-45-
pf:nSTAND32762 0.82-
pf:AAA_1440156AAA domain 0.02-
pf:AAA_241145AAA domain (Cdc48 subfamily) 0.009-
pf:AAA42171ATPase family associated with various cellular activities (AAA) 2.8e-09-
pf:AAA_2242154AAA domain 0.0003-
pf:AAA_542145AAA domain (dynein-related subfamily) 0.00024-
pf:AAA_1843124AAA domain 0.056-
pf:SKI4765Shikimate kinase 0.57-
pf:ResIII100145Type III restriction enzyme, res subunit 0.47-
pf:DNAX_ATPase_lid183230 2.1e-20-
pf:AAA_assoc_2194236AAA C-terminal domain 0.79-
pf:DNA_pol3_gamma3235357DNA polymerase III subunits gamma and tau domain III 1.1e-21-
pf:DNA_pol3_tau_4520591DNA polymerase III subunits tau domain IV DnaB-binding 2.4e-09-
pf:EAL575689EAL domain 0.0047-
pf:DNA_pol3_tau_5593731DNA polymerase III tau subunit V interacting with alpha 2.6e-45-
pf:DUF8439613674 0.019-

vvu:VV1_2003 pf:RuvB_N pf:AAA_16 pf:DNA_pol3_delta2 pf:nSTAND3 pf:AAA_14 pf:AAA_2 pf:AAA pf:AAA_22 pf:AAA_5 pf:AAA_18 pf:SKI pf:ResIII pf:DNAX_ATPase_lid pf:AAA_assoc_2 pf:DNA_pol3_gamma3 pf:DNA_pol3_tau_4 pf:EAL pf:DNA_pol3_tau_5 pf:DUF8439

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