SSDB Motif Search Result


Organism : Xenorhabdus nematophila ATCC 19061
Gene : XNC1_4035
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase
Motif idFromToDefinitionE valueScore
pf:RecD_N14113 2.1e-26-
pf:AAA_19168318AAA domain 4.6e-35-
pf:AAA_30168328AAA domain 9.6e-28-
pf:AAA_11168232AAA domain 4.8e-05-
pf:DEAD168288DEAD/DEAH box helicase 0.1-
pf:PhoH171315PhoH-like protein 0.18-
pf:UvrD-helicase172256UvrD/REP helicase N-terminal domain 9.8e-07-
pf:nSTAND3176207 0.0057-
pf:AAA_16177251AAA ATPase domain 0.037-
pf:NPHP3_N177238 0.6-
pf:AAA_22178299AAA domain 2.5e-05-
pf:ATPase178217KaiC 0.058-
pf:SLFN-g3_helicase179288 1.1e-05-
pf:NACHT179251NACHT domain 0.14-
pf:CbiA180222CobQ/CobB/MinD/ParA nucleotide binding domain 0.19-
pf:SRP54181213SRP54-type protein, GTPase domain 0.16-
pf:Viral_helicase1182225Viral (Superfamily 1) RNA helicase 0.87-
pf:NAT10_TcmA_helicase182299 4.4e-10-
pf:AAA_28182198AAA domain 0.12-
pf:FtsK_SpoIIIE182221FtsK/SpoIIIE family 0.26-
pf:DO-GTPase1182224 0.4-
pf:AAA_11276317AAA domain 0.46-
pf:DUF7966359403 0.83-
pf:SH3_13472527 1.3e-07-
pf:UvrD_C550603UvrD-like helicase C-terminal domain 0.014-
pf:Viral_helicase1551601Viral (Superfamily 1) RNA helicase 3.3e-08-
pf:UvrD_C_2554601UvrD-like helicase C-terminal domain 3.1e-13-

xne:XNC1_4035 pf:RecD_N pf:AAA_19 pf:AAA_30 pf:AAA_11 pf:DEAD pf:PhoH pf:UvrD-helicase pf:nSTAND3 pf:AAA_16 pf:NPHP3_N pf:AAA_22 pf:ATPase pf:SLFN-g3_helicase pf:NACHT pf:CbiA pf:SRP54 pf:Viral_helicase1 pf:NAT10_TcmA_helicase pf:AAA_28 pf:FtsK_SpoIIIE pf:DO-GTPase1 pf:AAA_11 pf:DUF7966 pf:SH3_13 pf:UvrD_C pf:Viral_helicase1 pf:UvrD_C_2

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