SSDB Motif Search Result


Organism : Xenorhabdus nematophila ATCC 19061
Gene : XNC1_4035
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase
Motif idFromToDefinitionE valueScore
pf:RecD_N8113 7.2e-34-
pf:AAA_19168318AAA domain 1.9e-35-
pf:AAA_30168328AAA domain 9.2e-28-
pf:AAA_11168232AAA domain 3.3e-05-
pf:DEAD168288DEAD/DEAH box helicase 0.059-
pf:T2SSE168202Type II/IV secretion system protein 0.23-
pf:PhoH171315PhoH-like protein 0.12-
pf:UvrD-helicase172256UvrD/REP helicase N-terminal domain 6.8e-07-
pf:nSTAND3175205 0.0037-
pf:AAA_16177256AAA ATPase domain 0.025-
pf:AAA_22178299AAA domain 1.7e-05-
pf:ATPase178217KaiC 0.04-
pf:SLFN-g3_helicase179286 3.3e-05-
pf:NACHT179251NACHT domain 0.096-
pf:CbiA180222CobQ/CobB/MinD/ParA nucleotide binding domain 0.13-
pf:SRP54181213SRP54-type protein, GTPase domain 0.11-
pf:Viral_helicase1182225Viral (Superfamily 1) RNA helicase 0.6-
pf:Helicase_RecD182299Helicase 5.9e-10-
pf:AAA_28182198AAA domain 0.092-
pf:FtsK_SpoIIIE182221FtsK/SpoIIIE family 0.18-
pf:DO-GTPase1182232 0.33-
pf:AAA_24182288AAA domain 0.38-
pf:AAA183232ATPase family associated with various cellular activities (AAA) 0.75-
pf:AAA_11276317AAA domain 0.32-
pf:SH3_13472528 6.3e-08-
pf:UvrD_C550603UvrD-like helicase C-terminal domain 0.0069-
pf:Viral_helicase1551601Viral (Superfamily 1) RNA helicase 2.3e-08-
pf:UvrD_C_2554600UvrD-like helicase C-terminal domain 2.9e-13-

xne:XNC1_4035 pf:RecD_N pf:AAA_19 pf:AAA_30 pf:AAA_11 pf:DEAD pf:T2SSE pf:PhoH pf:UvrD-helicase pf:nSTAND3 pf:AAA_16 pf:AAA_22 pf:ATPase pf:SLFN-g3_helicase pf:NACHT pf:CbiA pf:SRP54 pf:Viral_helicase1 pf:Helicase_RecD pf:AAA_28 pf:FtsK_SpoIIIE pf:DO-GTPase1 pf:AAA_24 pf:AAA pf:AAA_11 pf:SH3_13 pf:UvrD_C pf:Viral_helicase1 pf:UvrD_C_2

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