SSDB Motif Search Result


Organism : Yersinia pestis 91001 (biovar Microtus)
Gene : YP_2884
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; exodeoxyribonuclease V alpha chain
Motif idFromToDefinitionE valueScore
pf:RecD_N5112 8.3e-39-
pf:T2SSE171207Type II/IV secretion system protein 0.046-
pf:AAA_19173323AAA domain 2.7e-35-
pf:PhoH173320PhoH-like protein 0.00046-
pf:AAA_16174281AAA ATPase domain 0.0002-
pf:AAA_30175333AAA domain 3.6e-28-
pf:UvrD-helicase176241UvrD/REP helicase N-terminal domain 6.6e-06-
pf:nSTAND3176247 0.00041-
pf:AAA_11177235AAA domain 1.1e-05-
pf:MeaB181218 0.6-
pf:AAA_22182317AAA domain 1.3e-05-
pf:MukB182225MukB N-terminal 0.13-
pf:TrwB_AAD_bind182207Type IV secretion-system coupling protein DNA-binding domain 0.22-
pf:Flavi_DEAD183238Flavivirus DEAD domain 0.39-
pf:SLFN-g3_helicase184290 0.00058-
pf:CbiA185309CobQ/CobB/MinD/ParA nucleotide binding domain 0.015-
pf:SRP54186209SRP54-type protein, GTPase domain 0.3-
pf:Viral_helicase1187323Viral (Superfamily 1) RNA helicase 0.039-
pf:Helicase_RecD187304Helicase 9.9e-11-
pf:AAA_28187203AAA domain 0.1-
pf:FtsK_SpoIIIE187220FtsK/SpoIIIE family 0.24-
pf:NTPase_1187207NTPase 0.87-
pf:AAA188212ATPase family associated with various cellular activities (AAA) 0.45-
pf:AAA_11281322AAA domain 0.041-
pf:SH3_13493554 3.1e-08-
pf:Viral_helicase1573623Viral (Superfamily 1) RNA helicase 3.4e-06-
pf:UvrD_C_2575622UvrD-like helicase C-terminal domain 3.4e-13-
pf:UvrD_C577622UvrD-like helicase C-terminal domain 0.14-

ypm:YP_2884 pf:RecD_N pf:T2SSE pf:AAA_19 pf:PhoH pf:AAA_16 pf:AAA_30 pf:UvrD-helicase pf:nSTAND3 pf:AAA_11 pf:MeaB pf:AAA_22 pf:MukB pf:TrwB_AAD_bind pf:Flavi_DEAD pf:SLFN-g3_helicase pf:CbiA pf:SRP54 pf:Viral_helicase1 pf:Helicase_RecD pf:AAA_28 pf:FtsK_SpoIIIE pf:NTPase_1 pf:AAA pf:AAA_11 pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2 pf:UvrD_C

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