SSDB Paralog Search Result

Entry:riv:Riv7116_0267 (1487 a.a.)
Name:PAS domain S-box
KO:K13924 two-component system, chemotaxis family, CheB/CheR fusion protein

Search Result : 170 hits

                 Entry                                       KO      len   SW-score identity overlap
------------------------------------------------------------------ -----------------------------------------
riv:Riv7116_0266 PAS domain S-box                       K13924    1486     5933   0.616    1488    
riv:Riv7116_2494 PAS domain S-box                       K13924    1691     4088   0.446    1685    
riv:Riv7116_5709 PAS domain S-box                       K13924    1358     3493   0.413    1398    
riv:Riv7116_5757 PAS domain S-box                       K13924    1755     3447   0.384    1780    
riv:Riv7116_2065 signal transduction histidine kinase              814     1346   0.449    526     
riv:Riv7116_4087 PAS domain S-box                       K11527    2561     1254   0.350    720     
riv:Riv7116_4746 putative transmembrane sensor domain p            910      996   0.346    520     
riv:Riv7116_0522 signal transduction histidine kinase              763      981   0.388    518     
riv:Riv7116_2321 putative transmembrane sensor domain p            947      932   0.352    529     
riv:Riv7116_0607 signal transduction histidine kinase              867      931   0.358    506     
riv:Riv7116_5552 signal transduction histidine kinase              782      907   0.340    512     
riv:Riv7116_6677 PAS domain S-box                       K00575     618      842   0.292    626     
riv:Riv7116_0976 PAS domain S-box                                  793      763   0.280    690     
riv:Riv7116_2060 signal transduction histidine kinase              815      752   0.415    340     
riv:Riv7116_5740 PAS domain S-box                                  921      729   0.278    749     
riv:Riv7116_3386 PAS domain S-box                                  649      725   0.310    558     
riv:Riv7116_6610 PAS domain S-box                                  904      670   0.241    963     
riv:Riv7116_6438 signal transduction histidine kinase              634      650   0.331    456     
riv:Riv7116_5450 signal transduction histidine kinase             1288      646   0.309    482     
riv:Riv7116_5542 PAS domain S-box                                  665      642   0.303    547     
riv:Riv7116_5480 signal transduction histidine kinase             1146      553   0.305    462     
riv:Riv7116_5478 signal transduction histidine kinase             1048      538   0.296    463     
riv:Riv7116_4288 PAS domain S-box                                  760      538   0.272    544     
riv:Riv7116_2571 PAS/PAC sensor hybrid histidine kinase            837      521   0.254    781     
riv:Riv7116_2729 signal transduction histidine kinase              403      515   0.387    282     
riv:Riv7116_2828 signal transduction histidine kinase              568      515   0.284    542     
riv:Riv7116_0744 PAS domain S-box                                  786      510   0.243    758     
riv:Riv7116_0568 signal transduction histidine kinase             1169      499   0.291    492     
riv:Riv7116_3118 signal transduction histidine kinase              643      495   0.352    301     
riv:Riv7116_0237 signal transduction histidine kinase              427      488   0.367    283     
riv:Riv7116_4067 PAS domain S-box                                 1449      488   0.268    579     
riv:Riv7116_3027 PAS domain S-box                                 1092      479   0.256    577     
riv:Riv7116_3164 signal transduction histidine kinase             1130      466   0.272    578     
riv:Riv7116_3927 PAS domain S-box                                 1046      466   0.264    591     
riv:Riv7116_1283 histidine kinase with GAF domain       K11356     631      463   0.378    283     
riv:Riv7116_5440 signal transduction histidine kinase              578      460   0.345    267     
riv:Riv7116_6675 PAS domain S-box                       K13587     753      446   0.254    786     
riv:Riv7116_4671 PAS domain S-box                                  490      430   0.281    434     
riv:Riv7116_4555 PAS domain S-box                                  936      402   0.233    694     
riv:Riv7116_3617 PAS domain S-box                                  814      400   0.286    507     
riv:Riv7116_2059 PAS domain S-box                                  505      394   0.233    563     
riv:Riv7116_1084 signal transduction histidine kinase              399      378   0.299    301     
riv:Riv7116_0033 signal transduction histidine kinase              463      368   0.293    270     
riv:Riv7116_4163 signal transduction histidine kinase              398      367   0.289    291     
riv:Riv7116_2743 PAS domain S-box                                 1065      364   0.235    597     
riv:Riv7116_6676 chemotaxis response regulator containi K03412     248      363   0.319    216     
riv:Riv7116_3861 PAS domain S-box                                  560      360   0.263    418     
riv:Riv7116_1901 PAS domain S-box                                  652      354   0.244    594     
riv:Riv7116_3018 PAS domain S-box                                 1350      353   0.252    412     
riv:Riv7116_3587 PAS domain S-box                       K07769     644      353   0.247    503     
riv:Riv7116_0792 bacteriophytochrome (light-regulated s            574      349   0.300    277     
riv:Riv7116_1082 PAS domain S-box                                  562      348   0.251    550     
riv:Riv7116_0295 bacteriophytochrome (light-regulated s K11354     778      345   0.265    347     
riv:Riv7116_2217 fused histidine kinase/response regula            375      344   0.315    308     
riv:Riv7116_0630 signal transduction histidine kinase              366      343   0.289    322     
riv:Riv7116_0236 signal transduction histidine kinase   K11527     374      341   0.282    298     
riv:Riv7116_2595 putative sensor protein/domain protein            668      333   0.290    317     
riv:Riv7116_6044 histidine kinase                                  475      327   0.279    358     
riv:Riv7116_3383 PAS domain S-box                                  689      327   0.242    566     
riv:Riv7116_2727 PAS domain S-box                                  604      325   0.256    532     
riv:Riv7116_2368 chemotaxis response regulator containi K03412     189      323   0.326    178     
riv:Riv7116_2818 histidine kinase,histidine kinase,GAF             664      318   0.295    288     
riv:Riv7116_2730 signal transduction histidine kinase              376      316   0.272    294     
riv:Riv7116_4286 bacteriophytochrome (light-regulated s K11354     776      314   0.248    351     
riv:Riv7116_4681 signal transduction histidine kinase              392      307   0.272    279     
riv:Riv7116_4679 bacteriophytochrome (light-regulated s K11354     767      302   0.268    485     
riv:Riv7116_6406 histidine kinase with GAF domain                  684      300   0.275    276     
riv:Riv7116_3385 bacteriophytochrome (light-regulated s            495      300   0.255    318     
riv:Riv7116_2301 PAS domain S-box                                 1041      297   0.228    650     
riv:Riv7116_0989 histidine kinase                                  427      295   0.278    353     
riv:Riv7116_2726 PAS/PAC sensor signal transduction his            896      295   0.231    429     
riv:Riv7116_1169 signal transduction histidine kinase   K07636     436      286   0.234    398     
riv:Riv7116_4345 PAS domain S-box                                 1163      279   0.226    505     
riv:Riv7116_3666 signal transduction histidine kinase   K11527     364      277   0.281    299     
riv:Riv7116_4747 histidine kinase,Response regulator re            438      275   0.312    192     
riv:Riv7116_3221 histidine kinase                                  452      273   0.293    242     
riv:Riv7116_5538 PAS domain S-box                                  378      270   0.253    380     
riv:Riv7116_6047 PAS domain S-box                                 1007      270   0.223    537     
riv:Riv7116_1608 histidine kinase                                  307      269   0.264    261     
riv:Riv7116_2490 fused histidine kinase with GAF domain            604      266   0.310    213     
riv:Riv7116_1780 histidine kinase                                  459      266   0.273    253     
riv:Riv7116_5737 PAS domain S-box                                  994      266   0.196    577     
riv:Riv7116_2322 fused histidine kinase/response regula            432      260   0.291    213     
riv:Riv7116_0763 signal transduction histidine kinase              516      259   0.228    276     
riv:Riv7116_6611 response regulator with CheY-like rece K07658     125      258   0.344    131     
riv:Riv7116_2474 signal transduction histidine kinase              518      257   0.239    289     
riv:Riv7116_4627 chemotaxis protein histidine kinase-li K11526    1230      254   0.202    784     
riv:Riv7116_0913 histidine kinase with GAF domain                  417      253   0.274    288     
riv:Riv7116_1392 histidine kinase                       K11520     494      250   0.269    290     
riv:Riv7116_3352 histidine kinase,Response regulator re            428      248   0.378    127     
riv:Riv7116_0765 response regulator containing a CheY-l            222      248   0.301    183     
riv:Riv7116_3138 PAS domain S-box                                  791      247   0.249    630     
riv:Riv7116_0608 fused histidine kinase/response regula            443      241   0.319    166     
riv:Riv7116_0743 EAL domain-containing protein                     404      240   0.317    164     
riv:Riv7116_5756 diguanylate cyclase (GGDEF) domain-con            778      240   0.311    164     
riv:Riv7116_0533 response regulator containing a CheY-l K07814     408      239   0.353    119     
riv:Riv7116_0856 response regulator containing a CheY-l            194      239   0.302    182     
riv:Riv7116_3998 histidine kinase with GAF domain                  601      239   0.231    359     
riv:Riv7116_2381 response regulator with CheY-like rece K11329     242      238   0.366    123     
riv:Riv7116_5396 EAL domain-containing protein                     403      237   0.294    187     
riv:Riv7116_4778 signal transduction histidine kinase              403      237   0.282    277     
riv:Riv7116_5065 signal transduction histidine kinase              554      236   0.276    290     
riv:Riv7116_5551 histidine kinase,Response regulator re K02482     455      234   0.268    190     
riv:Riv7116_0280 histidine kinase,KaiB domain-containin K08479     398      233   0.240    304     
riv:Riv7116_2139 response regulator with CheY-like rece            166      232   0.339    127     
riv:Riv7116_5449 diguanylate cyclase (GGDEF) domain-con            315      231   0.282    209     
riv:Riv7116_5669 histidine kinase,Response regulator re            406      230   0.342    120     
riv:Riv7116_1759 histidine kinase                                  455      230   0.271    255     
riv:Riv7116_6717 PAS domain S-box                                  760      228   0.221    779     
riv:Riv7116_4554 PAS domain S-box                                 1013      222   0.320    128     
riv:Riv7116_2745 CheY-like receiver domain-containing p            141      216   0.328    125     
riv:Riv7116_2908 histidine kinase                       K11328     461      215   0.263    255     
riv:Riv7116_0597 response regulator containing a CheY-l            225      212   0.325    126     
riv:Riv7116_0235 CheY-like receiver domain-containing p            153      211   0.366    123     
riv:Riv7116_1902 response regulator with CheY-like rece            274      211   0.281    192     
riv:Riv7116_6781 response regulator with CheY-like rece K11523     125      210   0.331    118     
riv:Riv7116_5828 diguanylate cyclase (GGDEF) domain-con            618      208   0.313    134     
riv:Riv7116_1986 fused histidine kinase/response regula K02482     414      203   0.254    398     
riv:Riv7116_0505 PAS domain S-box                                 1394      203   0.217    677     
riv:Riv7116_3100 response regulator containing a CheY-l            220      202   0.381    118     
riv:Riv7116_3017 response regulator with CheY-like rece            128      201   0.373    126     
riv:Riv7116_3581 chemotaxis protein histidine kinase-li K11526     937      201   0.298    151     
riv:Riv7116_0776 response regulator with CheY-like rece K02658     121      200   0.270    122     
riv:Riv7116_5878 PAS domain S-box/diguanylate cyclase (            739      200   0.249    217     
riv:Riv7116_2470 response regulator with CheY-like rece            122      199   0.323    124     
riv:Riv7116_1402 diguanylate cyclase (GGDEF) domain-con            344      198   0.258    198     
riv:Riv7116_4751 histidine kinase,HAMP domain-containin            622      198   0.216    624     
riv:Riv7116_3369 signal transduction histidine kinase   K07644     484      197   0.261    253     
riv:Riv7116_6441 response regulator with CheY-like rece            202      194   0.298    121     
riv:Riv7116_2031 response regulator with CheY-like rece K10697     251      193   0.289    121     
riv:Riv7116_1168 response regulator with CheY-like rece K07657     250      193   0.259    174     
riv:Riv7116_3197 putative ATPase                                  1889      193   0.212    552     
riv:Riv7116_4622 response regulator containing a CheY-l K11522     405      191   0.306    134     
riv:Riv7116_1450 response regulator with CheY-like rece            143      189   0.297    128     
riv:Riv7116_0775 response regulator with CheY-like rece K02657     408      188   0.311    135     
riv:Riv7116_5635 response regulator containing a CheY-l            218      187   0.350    123     
riv:Riv7116_1417 histidine kinase                                  437      187   0.217    299     
riv:Riv7116_4168 histidine kinase                                  372      186   0.274    288     
riv:Riv7116_4295 histidine kinase,PAS domain-containing           1040      186   0.233    331     
riv:Riv7116_0003 bacteriophytochrome (light-regulated s           1096      186   0.219    351     
riv:Riv7116_2303 serine phosphatase RsbU, regulator of             374      185   0.319    119     
riv:Riv7116_5617 PAS domain S-box                       K02482     723      184   0.220    508     
riv:Riv7116_5970 histidine kinase                       K02482     596      181   0.201    373     
riv:Riv7116_2058 response regulator with CheY-like rece            124      180   0.310    129     
riv:Riv7116_5426 histidine kinase,histidine kinase,GAF            1150      177   0.282    202     
riv:Riv7116_3578 response regulator containing a CheY-l K11523     125      174   0.280    118     
riv:Riv7116_3930 response regulator with CheY-like rece            229      172   0.311    119     
riv:Riv7116_4253 response regulator with CheY-like rece K11523     120      172   0.305    118     
riv:Riv7116_2061 diguanylate cyclase (GGDEF) domain-con            748      170   0.224    389     
riv:Riv7116_5727 histidine kinase,HAMP domain-containin K02482     704      170   0.224    321     
riv:Riv7116_4623 response regulator with CheY-like rece K11523     120      169   0.292    120     
riv:Riv7116_2921 response regulator containing a CheY-l            210      166   0.352    122     
riv:Riv7116_5302 response regulator with CheY-like rece            239      165   0.234    141     
riv:Riv7116_1398 response regulator containing a CheY-l            134      164   0.345    110     
riv:Riv7116_0971 diguanylate cyclase (GGDEF) domain-con            818      163   0.261    211     
riv:Riv7116_0972 response regulator containing a CheY-l K11522     404      162   0.262    183     
riv:Riv7116_0912 response regulator with CheY-like rece            225      161   0.305    118     
riv:Riv7116_5458 response regulator with CheY-like rece K11521     247      161   0.287    129     
riv:Riv7116_3222 response regulator with CheY-like rece            236      161   0.278    198     
riv:Riv7116_3129 response regulator containing a CheY-l            213      160   0.389    95      
riv:Riv7116_3368 response regulator with CheY-like rece            227      159   0.322    118     
riv:Riv7116_5064 response regulator with CheY-like rece            226      153   0.286    126     
riv:Riv7116_5092 response regulator containing a CheY-l            149      153   0.238    126     
riv:Riv7116_1096 response regulator containing a CheY-l            231      152   0.277    119     
riv:Riv7116_5705 histidine kinase                                  430      152   0.249    221     
riv:Riv7116_1018 CheY-like receiver domain-containing p            136      148   0.304    112     
riv:Riv7116_1464 response regulator with CheY-like rece K02483     269      148   0.280    118     
riv:Riv7116_3572 response regulator containing a CheY-l K11522     257      147   0.300    100     
riv:Riv7116_2473 response regulator with CheY-like rece            222      146   0.308    120     
riv:Riv7116_1760 response regulator with CheY-like rece            231      140   0.281    121     

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