GFIT result for
aef
|
GFIT result for
aef
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| aef:GEV26_15875 (232 a.a.) |
-- |
sigma-70 family RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > aez:C3E78_15795(241) | 230 | 82.2 | 1245 | 6 | <> | RNA polymerase subunit sigma-70 | |||
| > aeb:C6I20_00785(234) | 228 | 78.5 | 1187 | 3 | <> | RNA polymerase subunit sigma-70 | |||
| > awn:NQV15_15970(?) | 228 | 77.2 | 1126 | 0 | -- | - | |||
| > aer:AERYTH_03095(216) | 215 | 71.6 | 1008 | 6 | <> | RNA polymerase sigma70 factor | |||
| > sgrg:L0C25_07670(?) | 210 | 58.1 | 808 | 0 | -- | - | |||
| > nbt:KLP28_05090(289) | 216 | 60.6 | 794 | 0 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > noy:EXE57_09760(264) | 206 | 59.2 | 787 | 14 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > ncq:K6T13_01715(263) | 210 | 56.2 | 780 | 13 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nmar:HPC71_01970(253) | 200 | 58.0 | 779 | 0 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nps:KRR39_17145(251) | 243 | 51.9 | 774 | 15 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > psim:KR76_03615(263) | 219 | 56.2 | 770 | 23 | <> | RNA polymerase ECF-type sigma factor | |||
| > nfc:KG111_01880(270) | 199 | 58.8 | 768 | 0 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nano:G5V58_19970(268) | 212 | 55.2 | 766 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ndk:I601_0817(287) | 234 | 53.0 | 766 | 16 | <> | sigX; RNA polymerase sigma factor SigX | |||
| > noq:LN652_15965(250) | 216 | 54.6 | 766 | 21 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > npi:G7071_02735(260) | 192 | 58.3 | 764 | 11 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nmes:H9L09_11435(238) | 185 | 61.1 | 762 | 18 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > naro:CFH99_03175(267) | 224 | 54.9 | 761 | 21 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nca:Noca_0489(266) | 186 | 59.7 | 756 | 12 | <> | K03088 | rpoE | sigma-70 region 2 domain protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nsn:EXE58_05300(244) | 242 | 52.5 | 747 | 12 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > noo:FE634_03555(256) | 215 | 54.4 | 744 | 17 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > npc:KUV85_15795(265) | 222 | 52.3 | 738 | 8 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > yia:LO772_19945(261) | 200 | 56.5 | 731 | 25 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spiq:OHA34_20490(?) | 186 | 58.6 | 727 | 0 | -- | - | |||
| > naqu:ENKNEFLB_04161(263) | 196 | 57.1 | 725 | 17 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 212 | 52.4 | 722 | 37 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psuu:Psuf_027560(307) | 222 | 51.8 | 721 | 125 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nro:K8W59_16475(180) | 177 | 60.5 | 719 | 8 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > actw:F7P10_24230(213) | 211 | 53.1 | 718 | 24 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > agra:AGRA3207_004707(215) | 193 | 56.0 | 717 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kqi:F1D05_16620(180) | 179 | 60.9 | 717 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > speu:CGZ69_20195(282) | 230 | 50.0 | 716 | 24 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cai:Caci_8330(282) | 197 | 56.9 | 713 | 41 | <> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtem:GCE86_22810(326) | 201 | 55.2 | 713 | 133 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mtua:CSH63_29090(327) | 205 | 53.7 | 713 | 149 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actn:L083_7652(305) | 217 | 50.7 | 712 | 66 | -> | K03088 | rpoE | adsA; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actq:OG417_49605(?) | 202 | 55.0 | 712 | 0 | -- | - | |||
| > ksl:OG809_07655(?) | 179 | 60.3 | 712 | 0 | -- | - | |||
| > plk:CIK06_26090(287) | 203 | 54.7 | 712 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stp:Strop_0350(311) | 204 | 53.9 | 712 | 58 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sast:CD934_17275(266) | 207 | 53.1 | 711 | 19 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srk:FGW37_14890(277) | 221 | 50.7 | 711 | 25 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 214 | 52.8 | 710 | 49 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 202 | 54.0 | 709 | 56 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mhaw:RMN56_14605(?) | 201 | 54.7 | 708 | 0 | -- | - | |||
| > saq:Sare_0420(310) | 204 | 53.4 | 708 | 55 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sct:SCAT_3420(248) | 205 | 53.2 | 708 | 27 | <> | RNA polymerase ECF-subfamily sigma factor | |||
| > scy:SCATT_34060(266) | 205 | 53.2 | 708 | 29 | <> | ECF subfamily RNA polymerase sigma factor | |||
| > plab:C6361_11750(291) | 212 | 51.9 | 707 | 141 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 212 | 51.9 | 707 | 140 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slx:SLAV_21485(270) | 203 | 54.2 | 707 | 45 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vma:VAB18032_01790(315) | 205 | 54.6 | 707 | 68 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 212 | 52.4 | 706 | 0 | -- | - | |||
| > msag:GCM10017556_19080(303) | 219 | 52.5 | 706 | 156 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ver:HUT12_28910(314) | 202 | 53.5 | 706 | 69 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spra:CP972_20380(276) | 212 | 53.3 | 705 | 48 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgf:HEP81_03470(264) | 207 | 52.7 | 704 | 22 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srj:SRO_3261(264) | 207 | 52.7 | 704 | 22 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ams:AMIS_75870(314) | 214 | 50.9 | 702 | 57 | -> | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mau:Micau_5649(323) | 200 | 53.5 | 702 | 126 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > smob:J7W19_14715(270) | 198 | 54.0 | 702 | 29 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svn:CP980_15030(271) | 199 | 53.8 | 702 | 45 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcab:HXZ27_28245(322) | 204 | 53.4 | 701 | 237 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mchl:PVK74_18390(323) | 200 | 53.5 | 701 | 120 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdrz:NEH16_17870(259) | 208 | 52.4 | 701 | 19 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccaz:COUCH_03770(309) | 212 | 52.4 | 699 | 74 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snk:CP967_19315(262) | 184 | 56.5 | 699 | 21 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sqz:FQU76_19775(290) | 230 | 48.7 | 699 | 36 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspn:LXH13_18565(257) | 210 | 51.9 | 699 | 33 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syan:NRK68_19110(272) | 207 | 52.7 | 699 | 44 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 200 | 54.0 | 698 | 76 | -> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdd:D9753_15265(259) | 199 | 54.8 | 698 | 25 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seng:OJ254_10515(?) | 196 | 53.6 | 698 | 0 | -- | - | |||
| > sgj:IAG43_17895(281) | 228 | 50.0 | 698 | 44 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 210 | 51.9 | 697 | 25 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schg:NRO40_17085(?) | 214 | 51.9 | 697 | 0 | -- | - | |||
| > sfug:CNQ36_19795(282) | 201 | 53.2 | 697 | 43 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgz:C0216_02125(264) | 199 | 53.3 | 697 | 31 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snq:CP978_19245(258) | 197 | 54.3 | 697 | 19 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stri:C7M71_017505(259) | 220 | 50.0 | 697 | 14 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > micb:MicB006_4659(323) | 200 | 53.0 | 696 | 118 | -> | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salb:XNR_3527(268) | 200 | 53.5 | 696 | 18 | <> | K03088 | rpoE | BldN RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > samb:SAM23877_4236(264) | 205 | 52.7 | 696 | 22 | <> | K03088 | rpoE | ECF sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sky:D0C37_19235(268) | 200 | 53.5 | 696 | 15 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snig:HEK616_72540(261) | 196 | 53.6 | 696 | 20 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spav:Spa2297_18565(264) | 202 | 52.5 | 696 | 24 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > src:M271_22495(268) | 219 | 50.2 | 696 | 20 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssia:A7J05_15960(261) | 201 | 53.2 | 696 | 21 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > staa:LDH80_22655(263) | 206 | 52.4 | 696 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svio:HWN34_17960(268) | 200 | 53.5 | 696 | 21 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksk:KSE_33690(273) | 201 | 52.7 | 695 | 176 | <> | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > nav:JQS30_01255(234) | 223 | 50.2 | 695 | 5 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sclf:BB341_16660(283) | 184 | 56.0 | 695 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgal:CP966_20830(256) | 199 | 53.8 | 695 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgm:GCM10017557_47180(258) | 211 | 51.7 | 695 | 22 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgob:test1122_15125(266) | 211 | 51.2 | 695 | 13 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slc:SL103_01485(261) | 196 | 53.6 | 695 | 18 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snr:SNOUR_22510(262) | 213 | 50.7 | 695 | 17 | <> | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stre:GZL_04927(262) | 213 | 50.7 | 695 | 21 | <> | K03088 | rpoE | RNA polymerase C sigma-24 subunit C ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stro:STRMOE7_18375(261) | 196 | 53.6 | 695 | 19 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |