GFIT result for
nmar
|
GFIT result for
nmar
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| nmar:HPC71_01970 (253 a.a.) |
-- |
sigma-70 family RNA polymerase sigma factor | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > nca:Noca_0489(266) | 265 | 77.7 | 1237 | 12 | <> | K03088 | rpoE | sigma-70 region 2 domain protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ndk:I601_0817(287) | 235 | 81.7 | 1225 | 16 | <> | sigX; RNA polymerase sigma factor SigX | |||
| > nano:G5V58_19970(268) | 268 | 72.8 | 1186 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > naro:CFH99_03175(267) | 272 | 71.3 | 1175 | 21 | <> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psim:KR76_03615(263) | 271 | 72.3 | 1175 | 23 | <> | RNA polymerase ECF-type sigma factor | |||
| > ncq:K6T13_01715(263) | 258 | 72.9 | 1171 | 13 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > noo:FE634_03555(256) | 258 | 74.0 | 1165 | 17 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > npi:G7071_02735(260) | 259 | 73.0 | 1164 | 11 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > noy:EXE57_09760(264) | 254 | 73.2 | 1161 | 14 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nfc:KG111_01880(270) | 264 | 71.6 | 1141 | 0 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nsn:EXE58_05300(244) | 243 | 75.3 | 1100 | 12 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > naqu:ENKNEFLB_04161(263) | 260 | 68.5 | 1097 | 17 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > noq:LN652_15965(250) | 257 | 71.2 | 1097 | 21 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > npc:KUV85_15795(265) | 204 | 78.9 | 1058 | 8 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nmes:H9L09_11435(238) | 208 | 76.9 | 1043 | 18 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nps:KRR39_17145(251) | 226 | 72.6 | 1014 | 15 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nro:K8W59_16475(180) | 179 | 80.4 | 960 | 8 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nbt:KLP28_05090(289) | 218 | 63.8 | 873 | 0 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nbe:Back2_21110(160) | 160 | 73.8 | 797 | 6 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aeb:C6I20_00785(234) | 240 | 53.7 | 784 | 3 | <> | RNA polymerase subunit sigma-70 | |||
| > aef:GEV26_15875(232) | 200 | 58.0 | 779 | 6 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > aer:AERYTH_03095(216) | 211 | 57.3 | 773 | 6 | <> | RNA polymerase sigma70 factor | |||
| > aez:C3E78_15795(241) | 219 | 55.7 | 753 | 6 | <> | RNA polymerase subunit sigma-70 | |||
| > scy:SCATT_34060(266) | 261 | 46.7 | 752 | 29 | <> | ECF subfamily RNA polymerase sigma factor | |||
| > agra:AGRA3207_004707(215) | 221 | 51.6 | 746 | 30 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sact:DMT42_22150(261) | 254 | 47.6 | 743 | 23 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssub:CP968_14860(272) | 272 | 46.3 | 741 | 17 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 270 | 47.8 | 740 | 37 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > awn:NQV15_15970(?) | 182 | 59.9 | 740 | 0 | -- | - | |||
| > smao:CAG99_11270(260) | 262 | 48.5 | 740 | 32 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stee:F3L20_02200(258) | 253 | 47.0 | 740 | 0 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kqi:F1D05_16620(180) | 179 | 62.0 | 739 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sast:CD934_17275(266) | 264 | 47.7 | 738 | 19 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svn:CP980_15030(271) | 266 | 46.2 | 738 | 45 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgj:IAG43_17895(281) | 276 | 46.4 | 737 | 44 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sseo:D0Z67_16470(261) | 256 | 47.7 | 737 | 15 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksl:OG809_07655(?) | 179 | 62.0 | 736 | 0 | -- | - | |||
| > sdd:D9753_15265(259) | 256 | 48.0 | 735 | 25 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgz:C0216_02125(264) | 260 | 46.9 | 735 | 31 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slau:SLA_3247(270) | 267 | 46.4 | 733 | 36 | <> | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slia:HA039_14355(264) | 261 | 46.7 | 733 | 20 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbro:GQF42_25090(259) | 254 | 46.9 | 732 | 32 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schg:NRO40_17085(?) | 255 | 47.1 | 732 | 0 | -- | - | |||
| > scir:STRCI_004614(257) | 252 | 46.8 | 732 | 40 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sct:SCAT_3420(248) | 214 | 49.5 | 732 | 27 | <> | RNA polymerase ECF-subfamily sigma factor | |||
| > sdv:BN159_3983(257) | 252 | 46.8 | 732 | 39 | <> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slx:SLAV_21485(270) | 244 | 47.5 | 732 | 45 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spra:CP972_20380(276) | 270 | 45.9 | 731 | 48 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sroc:RGF97_18830(?) | 266 | 47.0 | 731 | 0 | -- | - | |||
| > scyg:S1361_22385(259) | 256 | 46.1 | 730 | 31 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgal:CP966_20830(256) | 250 | 45.6 | 730 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgk:PET44_18605(?) | 266 | 45.5 | 730 | 0 | -- | - | |||
| > snq:CP978_19245(258) | 253 | 47.4 | 730 | 19 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strm:M444_19930(271) | 266 | 45.5 | 730 | 27 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kbu:Q4V64_30035(?) | 252 | 46.4 | 729 | 0 | -- | - | |||
| > scad:DN051_17815(256) | 251 | 46.6 | 729 | 31 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schf:IPT68_20630(256) | 251 | 46.6 | 729 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfb:CP974_17170(260) | 259 | 47.9 | 729 | 41 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgf:HEP81_03470(264) | 245 | 47.8 | 729 | 22 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slai:P8A22_22250(?) | 257 | 47.5 | 729 | 0 | -- | - | |||
| > srj:SRO_3261(264) | 245 | 47.8 | 729 | 22 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srn:A4G23_03168(260) | 259 | 47.9 | 729 | 46 | <> | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sata:C5746_18535(258) | 257 | 47.5 | 728 | 21 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scw:TU94_18620(259) | 254 | 46.5 | 728 | 15 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdrz:NEH16_17870(259) | 258 | 46.9 | 728 | 19 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shaw:CEB94_23325(256) | 251 | 46.6 | 728 | 26 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shun:DWB77_03416(262) | 258 | 47.3 | 728 | 18 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinn:ABB07_16780(?) | 253 | 46.6 | 728 | 0 | -- | - | |||
| > sle:sle_31530(259) | 254 | 46.5 | 728 | 15 | <> | K03088 | rpoE | sle_31530; RNA polymerase sigma factor sigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > splu:LK06_013405(259) | 256 | 47.3 | 728 | 25 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spun:BFF78_18770(261) | 258 | 46.9 | 728 | 31 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfic:EIZ62_13885(259) | 260 | 48.1 | 727 | 18 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snf:JYK04_04899(270) | 265 | 46.4 | 727 | 26 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspn:LXH13_18565(257) | 252 | 46.0 | 727 | 33 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strf:ASR50_20275(233) | 232 | 47.4 | 727 | 20 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stui:GCM10017668_39780(256) | 251 | 46.6 | 727 | 20 | <> | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svt:SVTN_16575(263) | 257 | 47.5 | 727 | 20 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgs:AVL59_03160(259) | 254 | 46.5 | 726 | 33 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgu:SGLAU_19145(256) | 251 | 47.0 | 726 | 23 | <> | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sho:SHJGH_5363(259) | 254 | 46.5 | 726 | 33 | <> | K03088 | rpoE | RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shy:SHJG_5601(259) | 254 | 46.5 | 726 | 34 | <> | K03088 | rpoE | RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sjn:RI060_17780(?) | 251 | 46.6 | 726 | 0 | -- | - | |||
| > skg:KJK29_15545(?) | 250 | 45.6 | 726 | 0 | -- | - | |||
| > sma:SAVERM_4735(258) | 253 | 46.6 | 726 | 23 | <> | K03088 | rpoE | bds; putative RNA polymerase ECF-subfamily sigma factor (BldN); K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphw:NFX46_02755(259) | 249 | 46.2 | 726 | 28 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxt:KPP03845_103447(271) | 245 | 46.5 | 726 | 28 | <> | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syan:NRK68_19110(272) | 268 | 46.6 | 726 | 44 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scha:CP983_18625(257) | 252 | 46.4 | 725 | 36 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scoa:QU709_17790(?) | 253 | 46.6 | 725 | 0 | -- | - | |||
| > scyn:N8I84_22950(?) | 252 | 47.2 | 725 | 0 | -- | - | |||
| > slon:LGI35_25495(263) | 260 | 46.5 | 725 | 29 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snk:CP967_19315(262) | 259 | 45.9 | 725 | 21 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > staa:LDH80_22655(263) | 257 | 47.5 | 725 | 24 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stsi:A4E84_23055(256) | 251 | 46.6 | 725 | 25 | <> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scin:CP977_15330(261) | 255 | 48.2 | 724 | 17 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seng:OJ254_10515(?) | 256 | 46.5 | 724 | 0 | -- | - | |||
| > sge:DWG14_03706(257) | 252 | 46.4 | 724 | 30 | <> | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srw:TUE45_04981(262) | 257 | 45.9 | 724 | 36 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sarg:HKX69_15000(?) | 248 | 47.2 | 723 | 0 | -- | - | |||
| > sgd:ELQ87_16910(257) | 252 | 46.0 | 723 | 20 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |