GFIT result for
ica
|
GFIT result for
ica
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ica:Intca_0653 (255 a.a.) |
-- |
RNA polymerase, sigma-24 subunit, ECF subfamily | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ted:U5C87_09070(?) | 253 | 71.9 | 1102 | 0 | -- | - | |||
| > teh:GKE56_11075(205) | 205 | 67.8 | 861 | 10 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > ssub:CP968_14860(272) | 247 | 53.8 | 770 | 17 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > syan:NRK68_19110(272) | 243 | 53.9 | 767 | 44 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sct:SCAT_3420(248) | 240 | 52.1 | 766 | 27 | <- | RNA polymerase ECF-subfamily sigma factor | |||
| > scy:SCATT_34060(266) | 240 | 52.1 | 766 | 29 | <- | ECF subfamily RNA polymerase sigma factor | |||
| > yia:LO772_19945(261) | 226 | 57.5 | 766 | 25 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snf:JYK04_04899(270) | 241 | 53.5 | 763 | 26 | <- | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ksk:KSE_33690(273) | 249 | 52.2 | 762 | 176 | <- | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > slx:SLAV_21485(270) | 241 | 54.8 | 762 | 45 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sroc:RGF97_18830(?) | 242 | 52.5 | 762 | 0 | -- | - | |||
| > shar:HUT13_15615(280) | 249 | 53.0 | 761 | 70 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyg:S1361_22385(259) | 233 | 55.4 | 760 | 31 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfug:CNQ36_19795(282) | 250 | 53.6 | 760 | 43 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sky:D0C37_19235(268) | 238 | 55.5 | 760 | 15 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svn:CP980_15030(271) | 241 | 54.4 | 759 | 45 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgob:test1122_15125(266) | 238 | 53.8 | 758 | 13 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgk:PET44_18605(?) | 241 | 53.9 | 757 | 0 | -- | - | |||
| > sseo:D0Z67_16470(261) | 220 | 56.4 | 757 | 15 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strm:M444_19930(271) | 241 | 53.9 | 757 | 27 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbro:GQF42_25090(259) | 236 | 54.7 | 756 | 32 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scx:AS200_21415(259) | 221 | 57.0 | 756 | 34 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spra:CP972_20380(276) | 241 | 54.4 | 755 | 48 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salb:XNR_3527(268) | 238 | 55.0 | 754 | 18 | <- | K03088 | rpoE | BldN RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sho:SHJGH_5363(259) | 236 | 54.7 | 754 | 33 | <- | K03088 | rpoE | RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shy:SHJG_5601(259) | 236 | 54.7 | 754 | 34 | <- | K03088 | rpoE | RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspo:DDQ41_18215(278) | 256 | 52.3 | 754 | 22 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svio:HWN34_17960(268) | 238 | 55.0 | 754 | 21 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sarg:HKX69_15000(?) | 240 | 53.3 | 753 | 0 | -- | - | |||
| > sgrf:SGFS_069300(?) | 249 | 53.0 | 753 | 0 | -- | - | |||
| > shk:J2N69_21060(282) | 241 | 51.9 | 753 | 27 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > skg:KJK29_15545(?) | 230 | 56.1 | 753 | 0 | -- | - | |||
| > stub:MMF93_18845(279) | 246 | 52.8 | 753 | 23 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sakb:K1J60_18415(275) | 245 | 53.9 | 752 | 31 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgz:C0216_02125(264) | 242 | 52.1 | 752 | 31 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinn:ABB07_16780(?) | 236 | 55.9 | 752 | 0 | -- | - | |||
| > sjn:RI060_17780(?) | 236 | 54.7 | 752 | 0 | -- | - | |||
| > snq:CP978_19245(258) | 216 | 58.3 | 752 | 19 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 237 | 52.7 | 751 | 37 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 250 | 51.2 | 751 | 49 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scoe:CP976_24770(256) | 230 | 56.1 | 751 | 30 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgs:AVL59_03160(259) | 218 | 57.3 | 751 | 33 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgx:H4W23_17935(263) | 236 | 55.1 | 751 | 23 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sma:SAVERM_4735(258) | 216 | 57.9 | 751 | 23 | <- | K03088 | rpoE | bds; putative RNA polymerase ECF-subfamily sigma factor (BldN); K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srug:F0345_11675(268) | 238 | 54.6 | 751 | 19 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srw:TUE45_04981(262) | 245 | 55.1 | 751 | 36 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scad:DN051_17815(256) | 215 | 58.1 | 750 | 31 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scae:IHE65_18705(258) | 225 | 56.0 | 750 | 36 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scb:SCAB_39121(258) | 225 | 56.0 | 750 | 34 | <- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdd:D9753_15265(259) | 218 | 56.9 | 750 | 25 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srk:FGW37_14890(277) | 250 | 52.0 | 750 | 25 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sve:SVEN_3185(261) | 234 | 55.1 | 750 | 26 | -- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shaw:CEB94_23325(256) | 236 | 54.2 | 749 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphv:F9278_29435(258) | 225 | 56.0 | 749 | 23 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stsi:A4E84_23055(256) | 236 | 54.2 | 749 | 25 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbh:SBI_06006(270) | 242 | 53.3 | 748 | 43 | <- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgu:SGLAU_19145(256) | 237 | 54.0 | 748 | 23 | -- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slf:JEQ17_26405(258) | 243 | 53.9 | 748 | 35 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > splu:LK06_013405(259) | 236 | 53.8 | 748 | 25 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stui:GCM10017668_39780(256) | 236 | 54.2 | 748 | 20 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snz:DC008_19740(257) | 242 | 53.3 | 747 | 28 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schg:NRO40_17085(?) | 212 | 55.2 | 746 | 0 | -- | - | |||
| > sge:DWG14_03706(257) | 224 | 55.8 | 746 | 30 | -- | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxt:KPP03845_103447(271) | 238 | 53.8 | 746 | 28 | <- | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > schf:IPT68_20630(256) | 236 | 53.8 | 745 | 24 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyn:N8I84_22950(?) | 234 | 55.1 | 745 | 0 | -- | - | |||
| > sgal:CP966_20830(256) | 236 | 53.4 | 745 | 24 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stir:DDW44_17150(278) | 255 | 50.6 | 745 | 26 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxn:IAG42_19960(267) | 246 | 52.8 | 745 | 24 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sci:B446_21020(259) | 215 | 57.2 | 744 | 33 | <- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgm:GCM10017557_47180(258) | 243 | 53.9 | 744 | 22 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agla:OIE69_18520(?) | 242 | 52.1 | 743 | 0 | -- | - | |||
| > sauo:BV401_25345(268) | 245 | 53.9 | 743 | 20 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgf:HEP81_03470(264) | 212 | 55.7 | 743 | 22 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgj:IAG43_17895(281) | 252 | 53.2 | 743 | 44 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srj:SRO_3261(264) | 212 | 55.7 | 743 | 22 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strt:A8713_17720(273) | 245 | 52.7 | 743 | 22 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxi:SXIM_29850(251) | 243 | 53.1 | 743 | 26 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sbat:G4Z16_13190(290) | 253 | 51.8 | 742 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sby:H7H31_14160(263) | 243 | 52.7 | 742 | 22 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scha:CP983_18625(257) | 242 | 52.9 | 742 | 36 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scin:CP977_15330(261) | 234 | 54.7 | 742 | 17 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdec:L3078_26980(258) | 225 | 55.6 | 742 | 34 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdur:M4V62_19590(263) | 242 | 53.3 | 742 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdx:C4B68_17430(256) | 242 | 52.5 | 742 | 21 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sov:QZH56_19460(?) | 218 | 56.4 | 742 | 0 | -- | - | |||
| > sphw:NFX46_02755(259) | 236 | 53.0 | 742 | 28 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spun:BFF78_18770(261) | 238 | 54.2 | 742 | 31 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strf:ASR50_20275(233) | 214 | 57.0 | 742 | 20 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strz:OYE22_13970(?) | 243 | 52.7 | 742 | 0 | -- | - | |||
| > svd:CP969_22130(276) | 219 | 57.5 | 742 | 24 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sast:CD934_17275(266) | 242 | 52.5 | 741 | 19 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slau:SLA_3247(270) | 247 | 52.2 | 741 | 36 | -- | K03088 | rpoE | ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slia:HA039_14355(264) | 242 | 52.5 | 741 | 20 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stee:F3L20_02200(258) | 214 | 57.0 | 741 | 0 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 245 | 53.1 | 740 | 0 | -- | - | |||
| > scw:TU94_18620(259) | 218 | 56.4 | 740 | 15 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sle:sle_31530(259) | 218 | 56.4 | 740 | 15 | <- | K03088 | rpoE | sle_31530; RNA polymerase sigma factor sigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slon:LGI35_25495(263) | 217 | 57.6 | 740 | 29 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kab:B7C62_14195(259) | 239 | 51.5 | 739 | 24 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |