GFIT result for
ncx
|
GFIT result for
ncx
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ncx:Nocox_01980 (221 a.a.) |
-- |
sigW1; ECF RNA polymerase sigma factor SigW | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > noa:BKM31_43150(216) | 221 | 91.4 | 1319 | 45 | <> | RNA polymerase subunit sigma-70 | |||
| > ngn:LCN96_02205(234) | 234 | 86.8 | 1295 | 48 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > now:GBF35_02340(212) | 221 | 88.7 | 1267 | 39 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > nfs:OIE67_45230(?) | 221 | 86.9 | 1261 | 0 | -- | - | |||
| > sro:Sros_0544(214) | 223 | 78.0 | 1103 | 36 | <> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > mhai:OHB01_13355(?) | 178 | 77.5 | 931 | 0 | -- | - | |||
| > agra:AGRA3207_004707(215) | 205 | 64.4 | 817 | 30 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tcu:Tcur_4444(220) | 212 | 61.3 | 817 | 17 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > actw:F7P10_24230(213) | 199 | 66.3 | 816 | 24 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > spiq:OHA34_20490(?) | 178 | 69.1 | 814 | 0 | -- | - | |||
| > mtua:CSH63_29090(327) | 210 | 62.4 | 797 | 149 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dfu:Dfulv_04225(277) | 227 | 57.7 | 794 | 71 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > mtem:GCE86_22810(326) | 210 | 63.3 | 794 | 133 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actn:L083_7652(305) | 215 | 59.5 | 793 | 66 | <- | K03088 | rpoE | adsA; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > amaz:LUW76_30435(253) | 178 | 69.1 | 793 | 27 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > msag:GCM10017556_19080(303) | 210 | 62.4 | 791 | 156 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mprn:Q3V37_09750(?) | 220 | 59.1 | 790 | 0 | -- | - | |||
| > aser:Asera_05600(281) | 201 | 64.2 | 789 | 28 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mau:Micau_5649(323) | 210 | 63.8 | 788 | 126 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mchl:PVK74_18390(323) | 210 | 63.8 | 788 | 120 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mhaw:RMN56_14605(?) | 210 | 62.9 | 788 | 0 | -- | - | |||
| > micb:MicB006_4659(323) | 210 | 63.8 | 788 | 118 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aih:Aiant_37260(314) | 222 | 56.8 | 785 | 51 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > actr:Asp14428_53360(307) | 214 | 59.3 | 784 | 76 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > afs:AFR_40205(313) | 227 | 57.3 | 784 | 86 | <- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aou:ACTOB_008204(?) | 222 | 56.8 | 784 | 0 | -- | - | |||
| > ccaz:COUCH_03770(309) | 214 | 59.8 | 784 | 74 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dros:Drose_03215(305) | 228 | 57.0 | 784 | 77 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mfeu:H1D33_04145(?) | 212 | 61.8 | 783 | 0 | -- | - | |||
| > saq:Sare_0420(310) | 212 | 61.8 | 783 | 55 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psuu:Psuf_027560(307) | 210 | 61.9 | 782 | 125 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stp:Strop_0350(311) | 219 | 58.9 | 781 | 58 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > vma:VAB18032_01790(315) | 212 | 60.4 | 781 | 68 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > atl:Athai_01830(281) | 219 | 58.4 | 780 | 39 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ver:HUT12_28910(314) | 211 | 60.2 | 780 | 69 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcab:HXZ27_28245(322) | 231 | 57.6 | 778 | 237 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > meno:Jiend_34730(315) | 212 | 60.4 | 777 | 96 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mcra:ID554_18470(314) | 211 | 60.2 | 776 | 56 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strh:GXP74_36695(244) | 210 | 60.0 | 776 | 20 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > actl:L3i22_101990(317) | 224 | 57.6 | 775 | 65 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acts:ACWT_7737(314) | 223 | 57.4 | 775 | 46 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ase:ACPL_7868(314) | 223 | 57.4 | 775 | 47 | <- | K03088 | rpoE | adsA; RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > daur:Daura_03330(311) | 216 | 57.9 | 775 | 79 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > plk:CIK06_26090(287) | 221 | 59.3 | 775 | 92 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgz:C0216_02125(264) | 204 | 60.8 | 774 | 31 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sxi:SXIM_29850(251) | 224 | 58.9 | 774 | 26 | <- | K03088 | rpoE | RNA polymerase sigma-70 factor, TIGR02952 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cati:CS0771_08550(308) | 213 | 61.0 | 773 | 49 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strc:AA958_20175(268) | 206 | 60.7 | 772 | 29 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svn:CP980_15030(271) | 204 | 60.8 | 771 | 45 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssub:CP968_14860(272) | 203 | 60.6 | 770 | 17 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dmat:Dmats_03420(307) | 208 | 59.1 | 769 | 67 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_03740(307) | 208 | 59.1 | 769 | 78 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > ksk:KSE_33690(273) | 220 | 59.5 | 768 | 176 | <- | bldN; putative RNA polymerase ECF subfamily sigma factor | |||
| > plab:C6361_11750(291) | 191 | 64.4 | 768 | 141 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plat:C6W10_08860(291) | 191 | 64.4 | 768 | 140 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sakb:K1J60_18415(275) | 201 | 60.2 | 768 | 31 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > agla:OIE69_18520(?) | 186 | 66.1 | 767 | 0 | -- | - | |||
| > ams:AMIS_75870(314) | 212 | 58.0 | 767 | 57 | <- | K03088 | rpoE | putative RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asic:Q0Z83_094000(?) | 193 | 63.2 | 767 | 0 | -- | - | |||
| > saov:G3H79_15715(257) | 233 | 54.5 | 767 | 27 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > shar:HUT13_15615(280) | 219 | 58.9 | 767 | 70 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > slx:SLAV_21485(270) | 204 | 60.8 | 767 | 45 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > abry:NYE86_32400(267) | 201 | 61.2 | 766 | 37 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfa:Sfla_3545(261) | 208 | 59.6 | 766 | 18 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snk:CP967_19315(262) | 204 | 60.8 | 766 | 21 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sant:QR300_19755(?) | 227 | 57.3 | 765 | 0 | -- | - | |||
| > sby:H7H31_14160(263) | 206 | 59.2 | 765 | 22 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > src:M271_22495(268) | 226 | 57.5 | 765 | 20 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfb:CP974_17170(260) | 233 | 55.8 | 764 | 41 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srn:A4G23_03168(260) | 233 | 55.8 | 764 | 46 | <- | K03088 | rpoE | sigL_2; ECF RNA polymerase sigma factor SigL; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strz:OYE22_13970(?) | 206 | 59.2 | 764 | 0 | -- | - | |||
| > actq:OG417_49605(?) | 208 | 60.1 | 763 | 0 | -- | - | |||
| > scae:IHE65_18705(258) | 200 | 60.0 | 763 | 36 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scb:SCAB_39121(258) | 200 | 60.0 | 763 | 34 | <- | K03088 | rpoE | AdsA-like sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sct:SCAT_3420(248) | 207 | 60.4 | 763 | 27 | <- | RNA polymerase ECF-subfamily sigma factor | |||
| > scy:SCATT_34060(266) | 207 | 60.4 | 763 | 29 | <- | ECF subfamily RNA polymerase sigma factor | |||
| > sdec:L3078_26980(258) | 200 | 60.0 | 763 | 34 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sdrz:NEH16_17870(259) | 232 | 55.2 | 763 | 19 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sphv:F9278_29435(258) | 200 | 60.0 | 763 | 23 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfk:KY5_4536c(272) | 227 | 57.3 | 762 | 35 | <- | K03088 | rpoE | putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgf:HEP81_03470(264) | 202 | 60.4 | 762 | 22 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgk:PET44_18605(?) | 204 | 59.8 | 762 | 0 | -- | - | |||
| > sgm:GCM10017557_47180(258) | 210 | 59.5 | 762 | 22 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > snq:CP978_19245(258) | 201 | 60.2 | 762 | 19 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srim:CP984_21350(260) | 196 | 61.7 | 762 | 23 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srj:SRO_3261(264) | 202 | 60.4 | 762 | 22 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > strm:M444_19930(271) | 204 | 59.8 | 762 | 27 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > svl:Strvi_0700(268) | 230 | 57.0 | 762 | 29 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > scyn:N8I84_22950(?) | 200 | 60.0 | 761 | 0 | -- | - | |||
| > slc:SL103_01485(261) | 222 | 58.6 | 761 | 18 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > srug:F0345_11675(268) | 205 | 60.0 | 761 | 19 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > stro:STRMOE7_18375(261) | 222 | 58.6 | 761 | 19 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pry:Prubr_31830(183) | 177 | 67.2 | 760 | 19 | <- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgv:B1H19_19700(261) | 222 | 58.1 | 760 | 15 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sld:T261_4497(261) | 222 | 58.1 | 760 | 18 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > salj:SMD11_3706(268) | 204 | 59.8 | 759 | 25 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sast:CD934_17275(266) | 206 | 59.7 | 759 | 19 | <- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seng:OJ254_10515(?) | 220 | 57.7 | 759 | 0 | -- | - | |||
| > snig:HEK616_72540(261) | 220 | 57.7 | 759 | 20 | <- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sspb:CP982_24045(256) | 229 | 56.3 | 759 | 25 | <- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |