GFIT result for
nml
|
GFIT result for
nml
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| nml:Namu_2948 (225 a.a.) |
-- |
transcriptional regulator, XRE family | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rha:RHA1_ro03528(206) | 206 | 55.8 | 711 | 9 | -- | possible transcriptional regulator | |||
| > roa:Pd630_LPD07915(206) | 206 | 55.8 | 711 | 7 | -- | hypothetical protein | |||
| > rko:JWS14_18525(206) | 206 | 56.3 | 707 | 8 | -- | helix-turn-helix transcriptional regulator | |||
| > rpsk:JWS13_25955(206) | 206 | 55.8 | 707 | 11 | -- | helix-turn-helix transcriptional regulator | |||
| > rop:ROP_33220(206) | 206 | 55.3 | 705 | 7 | -- | putative Xre family DNA-binding protein | |||
| > gob:Gobs_1729(195) | 197 | 56.9 | 687 | 7 | -- | transcriptional regulator, XRE family | |||
| > mmuc:C1S78_013600(199) | 191 | 57.1 | 651 | 7 | -- | helix-turn-helix transcriptional regulator | |||
| > maub:MAUB_03620(198) | 181 | 57.5 | 636 | 7 | -- | transcriptional regulator | |||
| > nbe:Back2_10580(192) | 186 | 54.8 | 635 | 1 | -- | transcriptional regulator | |||
| > kra:Krad_1434(232) | 191 | 55.5 | 633 | 36 | -- | transcriptional regulator, XRE family | |||
| > mphu:MPHO_09220(199) | 191 | 56.0 | 633 | 4 | -- | transcriptional regulator | |||
| > rer:RER_05770(214) | 216 | 50.5 | 628 | 6 | -- | putative Xre family DNA-binding protein | |||
| > rhb:NY08_2004(210) | 197 | 53.8 | 626 | 3 | -- | transcriptional regulator | |||
| > reb:XU06_03010(214) | 216 | 50.5 | 624 | 6 | -- | XRE family transcriptional regulator | |||
| > rey:O5Y_02755(211) | 201 | 52.2 | 620 | 5 | -- | XRE family transcriptional regulator | |||
| > tpr:Tpau_1418(203) | 202 | 50.5 | 618 | 14 | -- | transcriptional regulator, XRE family | |||
| > rhod:AOT96_13605(214) | 207 | 51.2 | 615 | 5 | -- | XRE family transcriptional regulator | |||
| > tpul:TPB0596_31200(204) | 205 | 52.7 | 603 | 16 | -- | transcriptional regulator | |||
| > rqi:C1M55_03265(211) | 192 | 52.6 | 602 | 4 | -- | XRE family transcriptional regulator | |||
| > tsm:ASU32_08055(200) | 199 | 51.8 | 601 | 17 | -- | XRE family transcriptional regulator | |||
| > rhs:A3Q41_03071(210) | 197 | 50.3 | 587 | 3 | -- | sinR; HTH-type transcriptional regulator SinR | |||
| > rfa:A3L23_00336(210) | 197 | 50.3 | 585 | 2 | -- | sinR; HTH-type transcriptional regulator SinR | |||
| > rgo:KYT97_22345(207) | 192 | 51.0 | 584 | 5 | -- | XRE family transcriptional regulator | |||
| > tsd:MTP03_16250(?) | 212 | 49.1 | 579 | 0 | -- | - | |||
| > dfu:Dfulv_22415(195) | 184 | 48.4 | 557 | 14 | -- | XRE family transcriptional regulator | |||
| > lse:F1C12_17095(192) | 189 | 46.0 | 540 | 6 | -- | helix-turn-helix domain-containing protein | |||
| > stsu:B7R87_31580(194) | 188 | 43.6 | 525 | 10 | -- | XRE family transcriptional regulator | |||
| > lari:KI794_02810(193) | 186 | 46.8 | 522 | 11 | -- | helix-turn-helix transcriptional regulator | |||
| > asic:Q0Z83_018260(?) | 193 | 46.1 | 512 | 0 | -- | - | |||
| > actl:L3i22_046720(193) | 193 | 44.0 | 510 | 9 | -- | transcription regulator | |||
| > nae:BHE16_05670(199) | 200 | 45.5 | 510 | 2 | -> | XRE family transcriptional regulator | |||
| > mcw:A8L33_06620(194) | 197 | 42.6 | 508 | 7 | -- | XRE family transcriptional regulator | |||
| > amau:DSM26151_07000(194) | 194 | 43.8 | 507 | 2 | -- | puuR; HTH-type transcriptional regulator PuuR | |||
| > asoi:MTP13_00440(195) | 189 | 43.9 | 507 | 6 | -- | helix-turn-helix domain-containing protein | |||
| > mspo:KXZ72_14475(197) | 191 | 40.8 | 507 | 5 | -- | XRE family transcriptional regulator | |||
| > cpre:Csp1_21990(192) | 184 | 46.2 | 505 | 5 | -- | puuR_2; HTH-type transcriptional regulator PuuR | |||
| > agro:JSQ78_01405(?) | 194 | 43.3 | 504 | 0 | -- | - | |||
| > minv:T9R20_05665(?) | 197 | 41.1 | 504 | 0 | -- | - | |||
| > rsa:RSal33209_0206(191) | 186 | 42.5 | 502 | 3 | -- | transcriptional regulator, Cro/CI family | |||
| > cwo:Cwoe_2578(182) | 178 | 45.5 | 501 | 25 | -- | transcriptional regulator, XRE family | |||
| > agg:C1N71_13140(194) | 197 | 42.1 | 497 | 3 | -- | XRE family transcriptional regulator | |||
| > actq:OG417_31410(?) | 184 | 44.6 | 496 | 0 | -- | - | |||
| > mdb:OVN18_01860(?) | 185 | 44.3 | 494 | 0 | -- | - | |||
| > alav:MTO99_18405(?) | 185 | 42.2 | 492 | 0 | -- | - | |||
| > malk:MalAC0309_2197(194) | 185 | 43.2 | 492 | 7 | -- | transcription regulator | |||
| > aww:G8758_00740(191) | 185 | 42.7 | 491 | 5 | -- | cupin domain-containing protein | |||
| > gpr:JQN66_03175(187) | 180 | 43.9 | 491 | 4 | -- | helix-turn-helix domain-containing protein | |||
| > aai:AARI_05790(187) | 180 | 43.3 | 490 | 3 | -- | putative transcriptional regulator | |||
| > acry:AC20117_11045(191) | 192 | 43.2 | 488 | 7 | -> | XRE family transcriptional regulator | |||
| > ary:ATC04_15185(187) | 180 | 43.3 | 488 | 5 | -- | XRE family transcriptional regulator | |||
| > arl:AFL94_02755(187) | 180 | 43.3 | 487 | 5 | -- | XRE family transcriptional regulator | |||
| > leu:Leucomu_02125(193) | 185 | 44.3 | 486 | 8 | -- | helix-turn-helix domain-containing protein | |||
| > sala:ESZ53_09135(194) | 186 | 41.9 | 486 | 2 | -- | helix-turn-helix domain-containing protein | |||
| > glu:F0M17_03030(188) | 180 | 42.8 | 485 | 2 | -- | helix-turn-helix domain-containing protein | |||
| > gnc:QQS42_03130(188) | 180 | 42.8 | 485 | 0 | -- | cupin domain-containing protein | |||
| > ccyc:SCMU_09710(191) | 190 | 44.7 | 484 | 4 | -- | transcription regulator | |||
| > gmy:XH9_05795(188) | 180 | 42.8 | 481 | 2 | -- | cupin domain-containing protein | |||
| > naei:GCM126_15290(191) | 185 | 43.2 | 479 | 0 | -- | transcription regulator | |||
| > satk:SA2016_1169(191) | 190 | 43.2 | 479 | 3 | -- | XRE family transcriptional regulator | |||
| > asun:KG104_02735(191) | 187 | 44.4 | 477 | 3 | -> | cupin domain-containing protein | |||
| > asuf:MNQ99_15525(191) | 192 | 41.7 | 476 | 3 | -- | helix-turn-helix domain-containing protein | |||
| > gar:AOZ07_03450(187) | 173 | 42.8 | 475 | 4 | -- | XRE family transcriptional regulator | |||
| > lall:MUN78_02680(193) | 185 | 43.8 | 474 | 7 | -- | helix-turn-helix domain-containing protein | |||
| > gmi:NMP99_03570(187) | 173 | 41.6 | 469 | 4 | -- | helix-turn-helix domain-containing protein | |||
| > ltn:KVY00_11540(?) | 186 | 43.5 | 467 | 0 | -- | - | |||
| > arx:ARZXY2_2938(191) | 190 | 41.6 | 466 | 3 | -> | XRE family transcriptional regulator | |||
| > arz:AUT26_04705(191) | 190 | 41.6 | 466 | 3 | -> | XRE family transcriptional regulator | |||
| > pue:FV140_05490(191) | 190 | 41.6 | 466 | 5 | -> | cupin domain-containing protein | |||
| > lyh:FrondiHNR_01730(?) | 185 | 40.5 | 465 | 0 | -- | - | |||
| > sata:C5746_26660(186) | 184 | 45.1 | 465 | 10 | -- | helix-turn-helix domain-containing protein | |||
| > ako:N9A08_03130(?) | 187 | 42.2 | 463 | 0 | -- | - | |||
| > lrp:MUN76_06320(193) | 185 | 40.5 | 463 | 9 | -- | XRE family transcriptional regulator | |||
| > pok:SMD14_04360(?) | 190 | 40.0 | 463 | 0 | -- | - | |||
| > arh:AHiyo8_21290(191) | 190 | 41.1 | 461 | 6 | -> | HTH-type transcriptional regulator PuuR | |||
| > pnv:JMY29_04965(191) | 190 | 41.6 | 461 | 3 | -> | cupin domain-containing protein | |||
| > aod:Q8Z05_12220(?) | 190 | 41.1 | 460 | 0 | -- | - | |||
| > ageg:MUG94_02655(191) | 180 | 42.2 | 459 | 1 | -- | cupin domain-containing protein | |||
| > ajr:N2K98_02945(?) | 187 | 43.3 | 459 | 0 | -- | - | |||
| > day:FV141_12395(190) | 179 | 44.7 | 459 | 3 | -- | cupin domain-containing protein | |||
| > derm:H7F30_04985(190) | 179 | 44.7 | 459 | 3 | -- | helix-turn-helix transcriptional regulator | |||
| > noh:G5V57_10040(189) | 188 | 42.6 | 459 | 12 | -- | cupin domain-containing protein | |||
| > aagi:NCTC2676_1_00535(192) | 190 | 42.6 | 458 | 3 | -> | puuR_1; HTH-type transcriptional regulator PuuR | |||
| > arn:CGK93_05455(191) | 190 | 41.1 | 458 | 4 | -> | XRE family transcriptional regulator | |||
| > arr:ARUE_c10100(191) | 190 | 41.1 | 457 | 3 | -> | putative helix-turn-helix domain protein | |||
| > aau:AAur_1055(191) | 190 | 41.1 | 456 | 3 | -> | putative Helix-turn-helix domain protein | |||
| > arty:AHiyo4_09680(191) | 190 | 40.5 | 455 | 1 | -> | HTH-type transcriptional regulator PuuR | |||
| > dgo:DGo_CA2401(188) | 179 | 44.1 | 455 | 2 | -- | transcription regulator | |||
| > llut:K1X41_05805(193) | 181 | 41.4 | 455 | 7 | -- | helix-turn-helix domain-containing protein | |||
| > many:MANY_44330(202) | 178 | 42.7 | 455 | 4 | -- | transcriptional regulator | |||
| > psul:AU252_05865(191) | 190 | 40.5 | 455 | 2 | -> | XRE family transcriptional regulator | |||
| > acao:NF551_03050(192) | 193 | 41.5 | 454 | 2 | -- | helix-turn-helix domain-containing protein | |||
| > arth:C3B78_04090(191) | 190 | 40.0 | 454 | 2 | -> | XRE family transcriptional regulator | |||
| > gln:F1C58_10065(194) | 188 | 42.6 | 454 | 7 | -- | helix-turn-helix domain-containing protein | |||
| > msv:Mesil_0715(187) | 190 | 41.6 | 454 | 0 | -- | transcriptional regulator, XRE family | |||
| > art:Arth_0847(191) | 190 | 40.5 | 452 | 3 | -> | transcriptional regulator, XRE family with cupin sensor | |||
| > paey:KUF55_02850(191) | 185 | 40.5 | 452 | 3 | -> | cupin domain-containing protein | |||
| > aru:ASPU41_09755(191) | 190 | 41.1 | 451 | 1 | -- | XRE family transcriptional regulator | |||
| > mll:B1R94_01945(186) | 183 | 41.0 | 451 | 5 | -- | XRE family transcriptional regulator | |||
| > ltr:EVS81_06510(193) | 185 | 42.2 | 450 | 6 | -- | XRE family transcriptional regulator | |||
| > arq:BWQ92_05790(191) | 191 | 42.4 | 448 | 2 | -> | XRE family transcriptional regulator | |||