GFIT result for
rha
|
GFIT result for
rha
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rha:RHA1_ro03528 (206 a.a.) |
-- |
possible transcriptional regulator | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > roa:Pd630_LPD07915(206) | 206 | 99.5 | 1339 | 7 | <> | hypothetical protein | |||
| > rko:JWS14_18525(206) | 206 | 97.1 | 1313 | 8 | <> | helix-turn-helix transcriptional regulator | |||
| > rop:ROP_33220(206) | 206 | 95.1 | 1274 | 7 | <> | putative Xre family DNA-binding protein | |||
| > rpsk:JWS13_25955(206) | 206 | 94.2 | 1258 | 11 | <> | helix-turn-helix transcriptional regulator | |||
| > rgo:KYT97_22345(207) | 195 | 65.6 | 821 | 5 | <- | XRE family transcriptional regulator | |||
| > rqi:C1M55_03265(211) | 198 | 63.1 | 821 | 4 | <- | XRE family transcriptional regulator | |||
| > rhod:AOT96_13605(214) | 198 | 63.1 | 820 | 5 | <- | XRE family transcriptional regulator | |||
| > rer:RER_05770(214) | 197 | 62.9 | 818 | 6 | <- | putative Xre family DNA-binding protein | |||
| > reb:XU06_03010(214) | 197 | 62.9 | 816 | 6 | <- | XRE family transcriptional regulator | |||
| > rey:O5Y_02755(211) | 197 | 62.9 | 816 | 5 | <- | XRE family transcriptional regulator | |||
| > rfa:A3L23_00336(210) | 201 | 60.7 | 816 | 2 | <- | sinR; HTH-type transcriptional regulator SinR | |||
| > rhs:A3Q41_03071(210) | 201 | 60.2 | 810 | 3 | <- | sinR; HTH-type transcriptional regulator SinR | |||
| > rhb:NY08_2004(210) | 197 | 61.4 | 801 | 3 | <- | transcriptional regulator | |||
| > gob:Gobs_1729(195) | 197 | 57.4 | 737 | 7 | <> | transcriptional regulator, XRE family | |||
| > nml:Namu_2948(225) | 206 | 55.8 | 711 | 14 | -- | transcriptional regulator, XRE family | |||
| > maub:MAUB_03620(198) | 189 | 57.7 | 706 | 7 | <- | transcriptional regulator | |||
| > mphu:MPHO_09220(199) | 189 | 58.2 | 701 | 4 | <- | transcriptional regulator | |||
| > mmuc:C1S78_013600(199) | 189 | 56.6 | 695 | 7 | <- | helix-turn-helix transcriptional regulator | |||
| > tsm:ASU32_08055(200) | 199 | 56.3 | 691 | 17 | <- | XRE family transcriptional regulator | |||
| > tpr:Tpau_1418(203) | 202 | 55.0 | 687 | 14 | <- | transcriptional regulator, XRE family | |||
| > tpul:TPB0596_31200(204) | 182 | 57.1 | 674 | 16 | <- | transcriptional regulator | |||
| > kra:Krad_1434(232) | 190 | 53.7 | 669 | 36 | <- | transcriptional regulator, XRE family | |||
| > nbe:Back2_10580(192) | 196 | 54.6 | 658 | 1 | <- | transcriptional regulator | |||
| > tsd:MTP03_16250(?) | 194 | 55.2 | 647 | 0 | -- | - | |||
| > dfu:Dfulv_22415(195) | 193 | 45.1 | 537 | 14 | -- | XRE family transcriptional regulator | |||
| > mspo:KXZ72_14475(197) | 188 | 43.6 | 520 | 5 | -- | XRE family transcriptional regulator | |||
| > lse:F1C12_17095(192) | 180 | 45.6 | 507 | 6 | -- | helix-turn-helix domain-containing protein | |||
| > lari:KI794_02810(193) | 180 | 46.1 | 501 | 11 | <- | helix-turn-helix transcriptional regulator | |||
| > stsu:B7R87_31580(194) | 191 | 41.4 | 500 | 10 | <- | XRE family transcriptional regulator | |||
| > actl:L3i22_046720(193) | 197 | 43.1 | 499 | 9 | -- | transcription regulator | |||
| > actq:OG417_31410(?) | 188 | 46.8 | 495 | 0 | -- | - | |||
| > aww:G8758_00740(191) | 184 | 43.5 | 490 | 5 | -- | cupin domain-containing protein | |||
| > asun:KG104_02735(191) | 185 | 43.2 | 489 | 3 | -- | cupin domain-containing protein | |||
| > cwo:Cwoe_2578(182) | 182 | 46.2 | 488 | 25 | <- | transcriptional regulator, XRE family | |||
| > lyh:FrondiHNR_01730(?) | 180 | 43.3 | 483 | 0 | -- | - | |||
| > satk:SA2016_1169(191) | 184 | 44.6 | 482 | 3 | -- | XRE family transcriptional regulator | |||
| > ageg:MUG94_02655(191) | 184 | 42.9 | 481 | 1 | -- | cupin domain-containing protein | |||
| > asoi:MTP13_00440(195) | 179 | 42.5 | 479 | 6 | <- | helix-turn-helix domain-containing protein | |||
| > asic:Q0Z83_018260(?) | 192 | 44.3 | 478 | 0 | -- | - | |||
| > noh:G5V57_10040(189) | 183 | 41.5 | 477 | 12 | -- | cupin domain-containing protein | |||
| > amau:DSM26151_07000(194) | 179 | 41.9 | 476 | 2 | <- | puuR; HTH-type transcriptional regulator PuuR | |||
| > mdb:OVN18_01860(?) | 181 | 43.1 | 475 | 0 | -- | - | |||
| > rsa:RSal33209_0206(191) | 180 | 42.8 | 473 | 3 | -- | transcriptional regulator, Cro/CI family | |||
| > aod:Q8Z05_12220(?) | 179 | 43.6 | 472 | 0 | -- | - | |||
| > art:Arth_0847(191) | 179 | 43.6 | 472 | 3 | -- | transcriptional regulator, XRE family with cupin sensor | |||
| > leu:Leucomu_02125(193) | 180 | 45.6 | 472 | 8 | <- | helix-turn-helix domain-containing protein | |||
| > mcw:A8L33_06620(194) | 187 | 39.6 | 472 | 7 | <- | XRE family transcriptional regulator | |||
| > pnv:JMY29_04965(191) | 179 | 43.6 | 470 | 3 | -- | cupin domain-containing protein | |||
| > agro:JSQ78_01405(?) | 179 | 40.8 | 469 | 0 | -- | - | |||
| > mcro:MI149_02470(202) | 205 | 39.0 | 469 | 4 | -- | XRE family transcriptional regulator | |||
| > nae:BHE16_05670(199) | 191 | 42.9 | 469 | 2 | <- | XRE family transcriptional regulator | |||
| > arr:ARUE_c10100(191) | 179 | 43.0 | 467 | 3 | -- | putative helix-turn-helix domain protein | |||
| > llut:K1X41_05805(193) | 187 | 43.3 | 467 | 7 | <- | helix-turn-helix domain-containing protein | |||
| > aau:AAur_1055(191) | 179 | 43.0 | 466 | 3 | -- | putative Helix-turn-helix domain protein | |||
| > kfv:AS188_05065(188) | 179 | 40.8 | 466 | 2 | <- | XRE family transcriptional regulator | |||
| > ltn:KVY00_11540(?) | 180 | 43.3 | 465 | 0 | -- | - | |||
| > ari:UM93_16610(192) | 183 | 44.3 | 464 | 3 | -- | XRE family transcriptional regulator | |||
| > arx:ARZXY2_2938(191) | 179 | 43.6 | 464 | 3 | <- | XRE family transcriptional regulator | |||
| > arz:AUT26_04705(191) | 179 | 43.6 | 464 | 3 | <- | XRE family transcriptional regulator | |||
| > pue:FV140_05490(191) | 179 | 43.6 | 464 | 5 | <- | cupin domain-containing protein | |||
| > ajg:KKR91_03015(191) | 180 | 41.7 | 463 | 0 | -- | cupin domain-containing protein | |||
| > arty:AHiyo4_09680(191) | 179 | 43.0 | 463 | 1 | -- | HTH-type transcriptional regulator PuuR | |||
| > psul:AU252_05865(191) | 179 | 43.0 | 463 | 2 | <- | XRE family transcriptional regulator | |||
| > arn:CGK93_05455(191) | 179 | 43.0 | 462 | 4 | -- | XRE family transcriptional regulator | |||
| > mhev:MHEL_18210(202) | 205 | 39.0 | 462 | 7 | -- | transcriptional regulator | |||
| > arh:AHiyo8_21290(191) | 179 | 42.5 | 460 | 6 | -- | HTH-type transcriptional regulator PuuR | |||
| > lrp:MUN76_06320(193) | 186 | 39.8 | 460 | 9 | <- | XRE family transcriptional regulator | |||
| > cpre:Csp1_21990(192) | 180 | 43.3 | 459 | 5 | <- | puuR_2; HTH-type transcriptional regulator PuuR | |||
| > msar:MSAR_19420(202) | 205 | 39.0 | 458 | 4 | -- | transcriptional regulator | |||
| > asuf:MNQ99_15525(191) | 183 | 42.6 | 457 | 3 | <- | helix-turn-helix domain-containing protein | |||
| > ptro:G5S35_29600(215) | 185 | 40.5 | 457 | 14 | -- | helix-turn-helix domain-containing protein | |||
| > maic:MAIC_52440(201) | 200 | 40.0 | 456 | 3 | -- | transcriptional regulator | |||
| > malk:MalAC0309_2197(194) | 180 | 40.0 | 456 | 7 | <- | transcription regulator | |||
| > minv:T9R20_05665(?) | 184 | 40.8 | 456 | 0 | -- | - | |||
| > agg:C1N71_13140(194) | 187 | 40.1 | 455 | 3 | <- | XRE family transcriptional regulator | |||
| > alav:MTO99_18405(?) | 185 | 41.6 | 454 | 0 | -- | - | |||
| > arth:C3B78_04090(191) | 179 | 42.5 | 454 | 2 | <- | XRE family transcriptional regulator | |||
| > dgo:DGo_CA2401(188) | 182 | 42.9 | 454 | 2 | -- | transcription regulator | |||
| > pdel:JCQ34_04085(?) | 179 | 43.0 | 454 | 0 | -- | - | |||
| > aagi:NCTC2676_1_00535(192) | 184 | 42.4 | 453 | 3 | -- | puuR_1; HTH-type transcriptional regulator PuuR | |||
| > ccyc:SCMU_09710(191) | 184 | 42.4 | 453 | 4 | -- | transcription regulator | |||
| > psey:GU243_20685(191) | 179 | 43.0 | 453 | 5 | <- | cupin domain-containing protein | |||
| > arq:BWQ92_05790(191) | 179 | 41.3 | 452 | 2 | <- | XRE family transcriptional regulator | |||
| > many:MANY_44330(202) | 203 | 38.9 | 452 | 4 | -- | transcriptional regulator | |||
| > artp:E5206_18525(191) | 179 | 41.9 | 451 | 1 | -- | cupin domain-containing protein | |||
| > mpae:K0O64_01890(186) | 187 | 40.1 | 451 | 2 | -- | XRE family transcriptional regulator | |||
| > mll:B1R94_01945(186) | 182 | 40.7 | 450 | 5 | -- | XRE family transcriptional regulator | |||
| > aru:ASPU41_09755(191) | 179 | 41.9 | 449 | 1 | -- | XRE family transcriptional regulator | |||
| > pok:SMD14_04360(?) | 179 | 42.5 | 449 | 0 | -- | - | |||
| > acry:AC20117_11045(191) | 184 | 42.9 | 448 | 7 | <- | XRE family transcriptional regulator | |||
| > apn:Asphe3_08840(191) | 179 | 42.5 | 448 | 3 | -- | putative transcriptional regulator | |||
| > paey:KUF55_02850(191) | 192 | 43.2 | 448 | 3 | -- | cupin domain-containing protein | |||
| > psni:NIBR502771_00455(191) | 179 | 42.5 | 448 | 2 | <- | cupin domain-containing protein | |||
| > arw:MB46_01150(195) | 179 | 42.5 | 447 | 2 | -- | XRE family transcriptional regulator | |||
| > lall:MUN78_02680(193) | 180 | 42.2 | 447 | 7 | <- | helix-turn-helix domain-containing protein | |||
| > sala:ESZ53_09135(194) | 180 | 41.7 | 447 | 2 | <- | helix-turn-helix domain-containing protein | |||
| > devo:H4N61_03210(197) | 180 | 39.4 | 446 | 2 | <- | helix-turn-helix transcriptional regulator | |||
| > msv:Mesil_0715(187) | 180 | 41.1 | 446 | 0 | <- | transcriptional regulator, XRE family | |||
| > aalm:LUX29_03655(204) | 196 | 36.7 | 445 | 4 | -- | XRE family transcriptional regulator | |||
| > kai:K32_10350(204) | 179 | 36.9 | 445 | 5 | -- | transcription regulator | |||