GFIT result for
palo
|
GFIT result for
palo
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| palo:E6C60_0302 (80 a.a.) |
-- |
helix-turn-helix domain protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pib:BBD41_28820(77) | 69 | 76.8 | 361 | 0 | -- | transcriptional regulator | |||
| > gym:GYMC10_3797(82) | 74 | 71.6 | 359 | 0 | -- | helix-turn-helix domain protein | |||
| > pwn:QNH46_12550(?) | 74 | 71.6 | 359 | 0 | -- | - | |||
| > plut:EI981_14070(77) | 70 | 75.7 | 358 | 1 | -- | XRE family transcriptional regulator | |||
| > plw:D5F53_13680(79) | 70 | 74.3 | 358 | 2 | -- | XRE family transcriptional regulator | |||
| > ppm:PPSC2_12800(77) | 70 | 75.7 | 357 | 0 | -- | transcriptional regulator | |||
| > ppoy:RE92_23970(77) | 70 | 75.7 | 357 | 0 | -- | transcriptional regulator | |||
| > pvo:PVOR_16909(77) | 70 | 74.3 | 357 | 0 | -- | helix-turn-helix domain protein | |||
| > pspn:L1F29_18270(?) | 72 | 73.6 | 356 | 0 | -- | - | |||
| > psab:PSAB_13735(77) | 70 | 74.3 | 353 | 1 | -- | helix-turn-helix domain-containing protein | |||
| > pmah:PTQ21_29190(78) | 70 | 72.9 | 352 | 1 | -- | XRE family transcriptional regulator | |||
| > ppab:KET34_26275(?) | 70 | 74.3 | 352 | 0 | -- | - | |||
| > pui:PUW25_13510(77) | 70 | 68.6 | 351 | 0 | -- | XRE family transcriptional regulator | |||
| > pbk:Back11_13970(74) | 71 | 63.4 | 307 | 0 | -- | hypothetical protein | |||
| > pjd:Pjdr2_0622(74) | 70 | 62.9 | 296 | 0 | -- | helix-turn-helix domain protein | |||
| > cchl:FPL14_07910(72) | 68 | 60.3 | 274 | 0 | -- | helix-turn-helix transcriptional regulator | |||
| > pmq:PM3016_4868(79) | 69 | 52.2 | 240 | 0 | -- | helix-turn-helix domain-containing protein | |||
| > pms:KNP414_05497(79) | 69 | 52.2 | 240 | 0 | -- | helix-turn-helix domain protein | |||
| > pmw:B2K_25230(79) | 69 | 52.2 | 240 | 0 | -- | transcriptional regulator | |||
| > brw:GOP56_11300(85) | 73 | 41.1 | 190 | 1 | -- | helix-turn-helix transcriptional regulator | |||
| > spor:SporoP33_04705(74) | 66 | 39.4 | 177 | 0 | -- | transcriptional regulator | |||
| > lgy:T479_01500(72) | 66 | 39.4 | 171 | 0 | -- | transcriptional regulator | |||
| > beo:BEH_07670(68) | 65 | 38.5 | 169 | 3 | -- | K07727 | K07727 | hypothetical protein; K07727 putative transcriptional regulator | |
| > bbor:RFB14_08530(?) | 69 | 39.1 | 168 | 0 | -- | - | |||
| > vg:28801012(69) | 66 | 39.4 | 165 | 92 | -- | BH781_gp30; Bacillus phage vB_BhaS-171; helix-turn-helix domain protein | |||
| > rst:ATY39_07045(74) | 67 | 35.8 | 162 | 1 | -- | transcriptional regulator | |||
| > pasa:BAOM_3015(74) | 66 | 39.4 | 161 | 2 | -- | hypothetical protein | |||
| > paeh:H70357_24830(74) | 66 | 36.4 | 157 | 1 | -- | hypothetical protein | |||
| > bae:BATR1942_07675(74) | 67 | 37.3 | 148 | 2 | -- | putative transcriptional regulator; phage SPbeta | |||
| > bti:BTG_15255(72) | 64 | 37.5 | 147 | 1 | -- | putative transcriptional regulator, phage SPbeta | |||
| > bthi:BTK_06610(72) | 71 | 33.8 | 146 | 2 | -- | transcriptional regulator, phage SPbeta | |||
| > bthr:YBT1520_06560(72) | 71 | 33.8 | 146 | 2 | -- | transcriptional regulator, phage SPbeta | |||
| > bthy:AQ980_24360(72) | 71 | 33.8 | 146 | 2 | -- | transcriptional regulator | |||
| > baz:BAMTA208_16245(71) | 69 | 34.8 | 142 | 3 | -- | helix-turn-helix domain protein | |||
| > bsia:CWD84_04640(71) | 69 | 34.8 | 141 | 0 | -- | XRE family transcriptional regulator | |||
| > bmur:ABE28_008765(71) | 65 | 32.3 | 140 | 0 | -- | hypothetical protein | |||
| > paee:R70331_25585(75) | 67 | 43.3 | 139 | 0 | -- | hypothetical protein | |||
| > lao:AOX59_00045(61) | 60 | 30.0 | 138 | 2 | -- | K21498 | higA-1 | hypothetical protein; K21498 antitoxin HigA-1 | |
| > bql:LL3_02306(73) | 67 | 34.3 | 135 | 0 | -- | K07727 | K07727 | yopS; SPBc2 prophage-derived uncharacterized HTH-type transcriptional regulator yopS; K07727 putative transcriptional regulator | |
| > pbut:DTO10_16555(75) | 61 | 41.0 | 134 | 1 | -- | XRE family transcriptional regulator | |||
| > bacl:BS34A_22940(74) | 67 | 34.3 | 133 | 2 | -- | yopS; XRE family transcriptional regulator | |||
| > bsh:BSU6051_20780(74) | 67 | 34.3 | 133 | 2 | -- | yopS; putative transcriptional regulator, phage SPbeta | |||
| > bsq:B657_20780(74) | 67 | 34.3 | 133 | 2 | -- | yopS; Putative transcriptional regulator | |||
| > bsu:BSU20780(74) | 67 | 34.3 | 133 | 2 | -- | yopS; XRE family transcriptional regulator | |||
| > bsul:BSUA_02235(74) | 67 | 34.3 | 133 | 2 | -- | yopS; transcriptional regulator | |||
| > bsut:BSUB_02235(74) | 67 | 34.3 | 133 | 2 | -- | yopS; transcriptional regulator | |||
| > bteq:G4P54_09510(74) | 67 | 34.3 | 133 | 3 | -- | helix-turn-helix transcriptional regulator | |||
| > hshi:MUO14_24180(?) | 58 | 36.2 | 133 | 0 | -- | - | |||
| > mlit:KDJ21_014985(71) | 65 | 35.4 | 132 | 0 | -- | helix-turn-helix transcriptional regulator | |||
| > bamy:V529_20830(73) | 67 | 32.8 | 130 | 1 | -- | K07727 | K07727 | SPBc2 prophage-derived HTH-type transcriptional regulator yopS; K07727 putative transcriptional regulator | |
| > pdh:B9T62_15465(78) | 75 | 36.0 | 130 | 0 | -- | hypothetical protein | |||
| > acit:HPK19_19235(70) | 66 | 30.3 | 129 | 1 | -- | helix-turn-helix transcriptional regulator | |||
| > ppsc:EHS13_20155(85) | 65 | 35.4 | 129 | 0 | -- | XRE family transcriptional regulator | |||
| > bacs:AUL54_20165(73) | 67 | 32.8 | 127 | 1 | -- | K07727 | K07727 | transcriptional regulator; K07727 putative transcriptional regulator | |
| > siv:SSIL_1385(71) | 66 | 30.3 | 127 | 0 | -- | hypothetical protein | |||
| > bmob:MLA2C4_12630(72) | 56 | 33.9 | 125 | 0 | -- | XRE family transcriptional regulator | |||
| > pcx:LPB68_04855(79) | 74 | 31.1 | 116 | 0 | -- | hypothetical protein | |||
| > bby:CY96_02260(243) | 71 | 31.0 | 113 | 4 | -- | methyltransferase | |||
| > btc:CT43_CH0540(243) | 71 | 31.0 | 113 | 4 | -- | ubiquinone/menaquinone biosynthesis methyltransferase UBIE | |||
| > btg:BTB_c06320(243) | 71 | 31.0 | 113 | 4 | -- | uBIE1; ubiquinone/menaquinone biosynthesis methyltransferase UBIE | |||
| > btht:H175_ch0543(243) | 71 | 31.0 | 113 | 4 | -- | Ubiquinone/menaquinone biosynthesis methyltransferase UBIE | |||
| > bthu:YBT1518_03265(243) | 71 | 31.0 | 113 | 4 | -- | Ubiquinone/menaquinone biosynthesis methyltransferase UBIE | |||
| > cohn:KCTCHS21_18470(70) | 61 | 31.1 | 113 | 0 | -- | hypothetical protein | |||
| > pvf:J5A55_10375(67) | 58 | 32.8 | 113 | 2 | -- | helix-turn-helix transcriptional regulator | |||
| > win:WPG_2223(67) | 55 | 34.5 | 112 | 1 | -- | K07729 | K07729 | hypothetical protein; K07729 putative transcriptional regulator | |
| > bxh:BAXH7_01406(65) | 48 | 37.5 | 111 | 0 | -- | hypothetical protein | |||
| > bacq:DOE78_19080(60) | 43 | 37.2 | 110 | 0 | -- | hypothetical protein | |||
| > aam:106498982(707) | 46 | 39.1 | 109 | 85 | -- | K25439 | CFAP100 | CFAP100, CCDC37; cilia and flagella associated protein 100; K25439 cilia- and flagella-associated protein 100 | |
| > arow:112976627(569) | 46 | 39.1 | 109 | 90 | -- | CFAP100; cilia- and flagella-associated protein 100 | |||
| > btk:BT9727_0529(243) | 74 | 31.1 | 109 | 3 | -- | conserved hypothetical protein, possible methyltransferase | |||
| > btt:HD73_0696(243) | 63 | 31.7 | 109 | 4 | -- | Ubiquinone/menaquinone biosynthesis methyltransferase UBIE | |||
| > tje:TJEJU_0396(69) | 65 | 30.8 | 109 | 1 | -- | K07729 | K07729 | putative Transcriptional regulator; K07729 putative transcriptional regulator | |
| > bcb:BCB4264_A0656(243) | 63 | 31.7 | 108 | 4 | -- | conserved hypothetical protein | |||
| > bcg:BCG9842_B4681(243) | 63 | 31.7 | 108 | 4 | -- | conserved hypothetical protein | |||
| > btn:BTF1_00810(243) | 63 | 31.7 | 108 | 4 | -- | hypothetical protein | |||
| > cmy:102940299(634) | 46 | 43.5 | 108 | 110 | -- | K25439 | CFAP100 | CFAP100; cilia- and flagella-associated protein 100 isoform X1; K25439 cilia- and flagella-associated protein 100 | |
| > hcj:HCR_02170(?) | 82 | 34.1 | 108 | 0 | -- | - | |||
| > sze:AW14_12560(66) | 63 | 31.7 | 108 | 0 | -- | transcriptional regulator | |||
| > sun:SUN_1792(98) | 53 | 34.0 | 107 | 0 | -- | K21498 | higA-1 | plasmid maintenance system antidote protein; K21498 antitoxin HigA-1 | |
| > cgot:J1899_08175(63) | 59 | 30.5 | 106 | 5 | -- | K07729 | K07729 | helix-turn-helix domain-containing protein; K07729 putative transcriptional regulator | |
| > fec:QNH15_12150(72) | 43 | 39.5 | 106 | 0 | -- | helix-turn-helix transcriptional regulator | |||
| > hhg:XM38_006680(318) | 57 | 33.3 | 106 | 7 | -- | K03087 | rpoS | sigD; RNA polymerase sigma factor SigD; K03087 RNA polymerase nonessential primary-like sigma factor | |
| > hyk:O9Z63_20695(523) | 73 | 30.1 | 106 | 1 | -- | hypothetical protein | |||
| > nnv:QNH39_16135(72) | 63 | 30.2 | 106 | 0 | -- | helix-turn-helix transcriptional regulator | |||
| > pah:Poras_1651(123) | 54 | 37.0 | 106 | 0 | -- | K18831 | higA | helix-turn-helix domain protein; K18831 HTH-type transcriptional regulator / antitoxin HigA | |
| > ceec:P3F56_04355(?) | 67 | 31.3 | 105 | 0 | -- | - | |||
| > cer:RGRSB_0842(318) | 67 | 31.3 | 105 | 4 | -- | K03087 | rpoS | sigD; RNA polymerase sigma factor SigD; K03087 RNA polymerase nonessential primary-like sigma factor | |
| > hhb:Hhub_2577(183) | 69 | 31.9 | 105 | 15 | -- | ArsR family transcription regulator | |||
| > msem:GMB29_19055(83) | 56 | 33.9 | 105 | 0 | -- | helix-turn-helix domain-containing protein | |||
| > mtt:Ftrac_3161(118) | 64 | 37.5 | 105 | 2 | -- | helix-turn-helix domain protein | |||
| > rpb:RPB_4148(101) | 53 | 30.2 | 105 | 2 | -- | K21498 | higA-1 | plasmid maintenance system antidote protein, XRE family; K21498 antitoxin HigA-1 | |
| > sacd:HS1genome_1008(121) | 62 | 30.6 | 105 | 0 | -- | K07108 | K07108 | transcriptional regulator; K07108 uncharacterized protein | |
| > cpic:101946085(633) | 46 | 41.3 | 104 | 116 | -- | K25439 | CFAP100 | CFAP100; cilia- and flagella-associated protein 100; K25439 cilia- and flagella-associated protein 100 | |
| > iel:124163710(412) | 34 | 44.1 | 104 | 0 | -- | uncharacterized protein LOC124163710 | |||
| > jie:OH818_07605(104) | 53 | 34.0 | 104 | 0 | -- | K21498 | higA-1 | HigA family addiction module antitoxin; K21498 antitoxin HigA-1 | |
| > mrv:120409490(633) | 46 | 41.3 | 104 | 116 | -- | K25439 | CFAP100 | CFAP100; cilia- and flagella-associated protein 100; K25439 cilia- and flagella-associated protein 100 | |
| > pvt:110088148(626) | 75 | 32.0 | 104 | 54 | -- | K25439 | CFAP100 | CFAP100; cilia- and flagella-associated protein 100; K25439 cilia- and flagella-associated protein 100 | |
| > rpt:Rpal_4828(101) | 53 | 30.2 | 104 | 3 | -- | K21498 | higA-1 | plasmid maintenance system antidote protein, XRE family; K21498 antitoxin HigA-1 | |
| > tst:117880682(633) | 46 | 41.3 | 104 | 105 | -- | K25439 | CFAP100 | CFAP100; cilia- and flagella-associated protein 100; K25439 cilia- and flagella-associated protein 100 | |
| > baca:FAY30_14605(72) | 56 | 30.4 | 103 | 0 | -- | helix-turn-helix transcriptional regulator | |||