KEGG   Porphyromonas asaccharolytica: Poras_1651
Entry
Poras_1651        CDS       T01485                                 
Name
(GenBank) helix-turn-helix domain protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pah  Porphyromonas asaccharolytica
Brite
KEGG Orthology (KO) [BR:pah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pah03000]
    Poras_1651
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pah02048]
    Poras_1651
Transcription factors [BR:pah03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Poras_1651
Prokaryotic defense system [BR:pah02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    Poras_1651
SSDB
Motif
Pfam: HTH_3 HTH_31 HTH_26 HTH_19 HTH_24 CENP-B_N HTH_28 HTH_23 HTH_38 YdaS_toxin MarR_2 Sigma70_r4 HTH_5 Sigma70_r4_2 Sigma70_r3 HTH_37 HTH_8 Tsi6 HTH_PafC HTH_AsnC-type DUF2774 HTH_Tnp_ISL3 KORA HTH_29 HTH_Tnp_1 DNA_pol3_delta_C HTH_35 HTH_36 Smoothelin
Other DBs
NCBI-ProteinID: AEE13582
UniProt: F4KP53
LinkDB
Position
2101843..2102214
AA seq 123 aa
MYTEEQYRYALARVEALLPRMEDETMSAPEEQELAIMSDVVASYEEEHYPLESLTLGELI
SYALKEQGKSQAELARELGISPSRVSDFVNDKSEPSLSLAGRICQALGLSAELVLGCATP
TYA
NT seq 372 nt   +upstreamnt  +downstreamnt
atgtatacagaagaacaatatagatatgctctagctcgtgtggaggcactcctgcctcgt
atggaggatgagacaatgagtgcgcccgaagagcaggagttggcgattatgagtgatgtg
gtcgcctcgtacgaagaggagcattatccgctagagagcctaacgctaggcgaactaatc
agctatgccctcaaggaacagggcaagtctcaggcagagctagcccgtgaactggggatc
tctccatctcgtgtgagtgacttcgtcaatgacaagagcgagccatcgctctcgctagcg
gggcgcatctgtcaagcactgggactctctgccgagctggtgctaggctgtgctacacca
acctatgcgtag

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