GFIT result for
pdec
|
GFIT result for
pdec
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pdec:H1Q58_09480 (177 a.a.) |
-- |
K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pmat:BBI11_10300(177) | 177 | 96.6 | 1138 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > prt:AUC31_00550(177) | 177 | 97.2 | 1133 | 5 | <> | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plx:CW734_10830(177) | 177 | 96.6 | 1129 | 2 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppla:BBI15_04845(177) | 177 | 96.0 | 1116 | 3 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > play:DNR44_010980(177) | 177 | 81.9 | 1012 | 8 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pana:BBH88_10130(177) | 177 | 83.1 | 1011 | 3 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pdg:BCM40_06175(177) | 177 | 80.8 | 980 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pln:Plano_1811(177) | 177 | 79.7 | 972 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfae:AJGP001_10495(177) | 172 | 81.4 | 969 | 7 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pku:AUO94_06650(177) | 172 | 81.4 | 969 | 8 | <> | K03088 | rpoE | RNA polymerase subunit sigma; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pll:I858_013835(177) | 177 | 79.1 | 969 | 6 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phc:BBI08_05985(177) | 177 | 79.1 | 967 | 3 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pgq:FK545_19445(208) | 172 | 82.0 | 963 | 2 | -> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmar:B0X71_11570(177) | 175 | 79.4 | 958 | 9 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > panc:E2636_09575(180) | 166 | 73.5 | 854 | 4 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lyc:FH508_0006830(177) | 168 | 72.6 | 840 | 10 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyh:D0S48_03820(178) | 170 | 71.8 | 839 | 19 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spsy:AZE41_13660(187) | 174 | 72.4 | 837 | 13 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lmac:I6G82_12140(184) | 167 | 72.5 | 828 | 14 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lfu:HR49_17600(177) | 167 | 72.5 | 827 | 8 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyo:PB01_07415(178) | 177 | 70.1 | 826 | 18 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > liu:OU989_05935(?) | 167 | 71.9 | 824 | 0 | -- | - | |||
| > psyb:KD050_19255(?) | 174 | 69.5 | 823 | 0 | -- | - | |||
| > lagr:FJQ98_07205(184) | 168 | 70.8 | 822 | 18 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lyb:C3943_07250(177) | 168 | 71.4 | 822 | 25 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lcap:ICJ70_18185(184) | 167 | 71.9 | 820 | 16 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lys:LBYS11_06020(184) | 167 | 71.9 | 820 | 12 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lpak:GDS87_06305(184) | 168 | 70.8 | 819 | 25 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spoo:J3U78_05120(179) | 174 | 69.0 | 817 | 10 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lgy:T479_06215(177) | 168 | 71.4 | 816 | 9 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > baco:OXB_2315(178) | 173 | 71.1 | 809 | 11 | <> | K03088 | rpoE | DNA-directed RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > llb:R6U77_18090(?) | 168 | 67.9 | 805 | 0 | -- | - | |||
| > lyp:MTP04_14840(?) | 166 | 71.1 | 804 | 0 | -- | - | |||
| > stho:QNH10_12520(175) | 175 | 67.4 | 804 | 9 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lsp:Bsph_1728(173) | 163 | 71.2 | 798 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor sigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > uth:DKZ56_08080(?) | 166 | 70.5 | 793 | 0 | -- | - | |||
| > paek:D3873_05480(174) | 170 | 67.6 | 782 | 4 | <> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > siv:SSIL_2770(177) | 171 | 68.4 | 778 | 11 | <> | K03088 | rpoE | DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lyg:C1N55_07865(180) | 166 | 67.5 | 773 | 6 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sob:CSE16_05750(176) | 171 | 64.9 | 767 | 18 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spop:SporoP37_15320(174) | 167 | 64.7 | 764 | 2 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spor:SporoP33_14985(174) | 167 | 64.7 | 764 | 2 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > surl:BI350_11455(178) | 176 | 65.3 | 763 | 4 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sure:SporoP32a_15635(175) | 175 | 64.0 | 760 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lyz:DCE79_05530(177) | 174 | 63.2 | 759 | 14 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spae:E2C16_07585(178) | 176 | 63.6 | 759 | 3 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssil:SOLI23_04725(177) | 171 | 67.3 | 759 | 13 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spos:DV702_03315(172) | 171 | 62.0 | 734 | 6 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cspg:LS684_13545(182) | 169 | 60.4 | 694 | 0 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ntx:NQZ71_09080(?) | 175 | 57.1 | 691 | 0 | -- | - | |||
| > baci:B1NLA3E_15005(177) | 168 | 59.5 | 689 | 2 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jeo:JMA_20200(173) | 168 | 58.9 | 687 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bmet:BMMGA3_10965(183) | 166 | 60.2 | 684 | 2 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bacq:DOE78_16305(175) | 172 | 59.3 | 683 | 9 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bou:I5818_10170(178) | 174 | 58.0 | 681 | 17 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bif:N288_17290(183) | 165 | 59.4 | 677 | 20 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > baqu:K6959_10165(184) | 167 | 61.1 | 675 | 8 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhai:KJK41_14530(184) | 176 | 58.0 | 674 | 9 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bcir:C2I06_08430(181) | 176 | 56.8 | 672 | 12 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bmur:ABE28_014470(186) | 169 | 53.8 | 670 | 5 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > csua:IM538_15980(183) | 166 | 57.8 | 669 | 13 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hli:HLI_00270(180) | 177 | 54.2 | 669 | 6 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bko:CKF48_18710(183) | 172 | 57.0 | 666 | 10 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cfir:NAF01_17795(183) | 165 | 58.2 | 665 | 8 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbut:DTO10_02510(186) | 169 | 54.4 | 665 | 8 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pks:IE339_18105(182) | 170 | 54.7 | 665 | 11 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bsj:UP17_15610(187) | 174 | 55.2 | 664 | 7 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mjo:FOF60_16295(183) | 166 | 57.8 | 664 | 17 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bon:A361_19695(183) | 166 | 58.4 | 663 | 10 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cpss:M5V91_01245(?) | 166 | 58.4 | 663 | 0 | -- | - | |||
| > msut:LC048_06185(?) | 166 | 57.8 | 663 | 0 | -- | - | |||
| > csoa:LIS82_18440(183) | 169 | 56.2 | 661 | 18 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bcoh:BC6307_13825(178) | 175 | 56.6 | 658 | 24 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bda:FSZ17_15160(183) | 166 | 56.6 | 658 | 19 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gst:HW35_03545(183) | 172 | 55.8 | 654 | 2 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > raz:U9J35_14455(?) | 166 | 57.2 | 654 | 0 | -- | - | |||
| > cgot:J1899_14380(179) | 178 | 53.9 | 653 | 10 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ndt:L1999_20785(183) | 172 | 55.2 | 653 | 3 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nmk:CHR53_19070(183) | 165 | 56.4 | 653 | 11 | <> | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rmf:D5E69_13725(179) | 165 | 57.0 | 652 | 5 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acai:ISX45_09290(182) | 174 | 55.2 | 651 | 1 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfri:L8956_16320(186) | 172 | 55.2 | 651 | 9 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ptb:DER53_15830(182) | 175 | 53.7 | 651 | 2 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aqt:FN924_10055(173) | 170 | 54.1 | 650 | 15 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gwc:GWCH70_2200(182) | 175 | 53.1 | 648 | 2 | <- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hsan:MUN89_11875(?) | 176 | 51.7 | 647 | 0 | -- | - | |||
| > nnv:QNH39_17705(183) | 165 | 55.8 | 647 | 0 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bvq:FHE72_14205(184) | 166 | 57.2 | 646 | 10 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hmn:HM131_10345(179) | 172 | 52.3 | 646 | 6 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msem:GMB29_16775(182) | 166 | 54.8 | 646 | 3 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bwh:A9C19_07275(183) | 168 | 56.0 | 643 | 10 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fhl:OE105_06775(173) | 173 | 53.8 | 643 | 6 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > meku:HUW50_26515(182) | 174 | 54.6 | 643 | 6 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blen:NCTC4824_01875(177) | 172 | 54.7 | 642 | 8 | <> | K03088 | rpoE | sigX_1; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > parg:PspKH34_12510(182) | 174 | 54.0 | 640 | 4 | <- | K03088 | rpoE | sigX; ECF RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rax:KO561_10540(179) | 170 | 52.9 | 640 | 14 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhk:B4U37_13045(178) | 177 | 53.7 | 639 | 19 | <- | K03088 | rpoE | RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > faf:OE104_04160(173) | 173 | 53.2 | 639 | 3 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hhd:HBHAL_3324(177) | 172 | 52.3 | 638 | 3 | <- | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > baca:FAY30_16185(183) | 172 | 54.1 | 632 | 12 | <> | K03088 | rpoE | sigX; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |