Planococcus kocurii: AUO94_06650
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Entry
AUO94_06650 CDS
T04200
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pku
Planococcus kocurii
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pku03021
]
AUO94_06650
Transcription machinery [BR:
pku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AUO94_06650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ALS78358
LinkDB
All DBs
Position
3126122..3126655
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AA seq
177 aa
AA seq
DB search
MNDSVFHRLYDEFHQDVFQFLIYLVKNRHVSEDLMQEVYIRAFRAYDRFEGRSSEKTWLF
SIAKNVAIDHFRKTAVRTKHSMAYFDWETQQLVSSEKLPEEVSLLNEDKIFLYKALDTCT
GDQKMVVIMRFFQDLSIAETAEVLGWTEGKVKTTQHRAIKALREKLIAREGGDDNVK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgactccgttttccatcgactgtacgatgaatttcatcaggatgtctttcagttt
ttgatttatctggtgaaaaataggcatgtgtcagaagacttgatgcaagaagtgtatatt
cgtgcctttcgagcatacgatcgctttgaaggaagaagttcagaaaagacatggcttttt
tcgattgcaaaaaacgtggcaatcgatcattttcggaaaacagcagtacgcacaaaacat
tcgatggcgtattttgattgggaaacacaacaattggtgtcgtctgaaaaactcccagaa
gaagtttccttattgaatgaagataaaatatttctttataaagcattggatacgtgtaca
ggagatcagaaaatggtcgtcataatgcggttttttcaagacttgtcgatcgcagaaact
gcagaagttttaggctggactgaaggaaaagtgaagacaacacaacatcgtgcaataaaa
gcattacgtgaaaaattaatagctagggaagggggagacgacaatgtcaaatga
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