Vibrio cholerae O1 El Tor N16961: VCA0572
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Entry
VCA0572 CDS
T00034
Gene name
ddl
Definition
(RefSeq) D-alanyl-alanine synthetase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00473
D-Alanine metabolism
vch00550
Peptidoglycan biosynthesis
vch01100
Metabolic pathways
vch01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00473 D-Alanine metabolism
VCA0572 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VCA0572 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
VCA0572 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vch01011
]
VCA0572 (ddl)
Enzymes [BR:
vch01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
VCA0572 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
vch01011
]
Precursor biosynthesis
Amino acid ligase
VCA0572 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATPgrasp_YheCD
Glutaminase
Motif
Other DBs
NCBI-GeneID:
2612376
NCBI-ProteinID:
NP_232962
UniProt:
Q9KM17
LinkDB
All DBs
Structure
PDB:
6DGI
Thumbnails
Position
II:complement(509159..510163)
Genome map
AA seq
334 aa
AA seq
DB search
MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLD
TNSATLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITS
KLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQI
APAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSA
NSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPG
MTPISMFPKMLEHNGHRFSEFLVQCVTNTLVNAK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactaagacaacaatcctacttttgtgcggtggcggctcatctgagcacgaaatttct
ctcgtatcagccaactacatccaacaacagcttgaactgactccagagtttcacgtgatt
cgagtcgagatgaaaaaagagggatggttttccgaacaaggagcccttgtatacctcgat
acaaatagcgcaacattaaatagcgataaggcttcctacccaatagattttgttgttcct
tgcatccatggtttcccgggagaaactggggatattcaatccatgttagaactggcaggc
attccttatctaggctgtgggccagaagccagtgcaaacagctttaacaaaatcacgtcc
aaactatggtatgacgcattagatattcctaacacaccgtatctatttttaacccaaaat
acaccaagctcgattgataaagccaagcaagcttttggtcattggggaagtatctttgtc
aaagctgctcgtcagggttcttcagtcggatgctacaaagtaaccacagaagatcagatt
gcccccgccattgaggctgcttttggtttctcagagcaagttcttgtcgagcaagccgtt
aaacctagagagttagaggtttctgcttatgagatgaacggaaaactctatatctcaaaa
ccgggagaagtgattgcaccagaaggtacattctattcatatgaagaaaagtacagtgcg
aatagccacgccagaaccgtcttagaagctgaaaatctaaccgagaaacacaaagaatta
attcaaacatatgctgaacgtgtattcatccatatgaagcttcgtcatttatctcggatc
gactttttcttgactcaagagggacaaatttacctcaatgaggtcaatacatttccagga
atgacaccgatttccatgtttccgaaaatgctagagcataacggacaccgatttagtgaa
ttcctcgtgcaatgtgtcaccaacacattagtaaatgcgaagtag
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